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1 Data integration strategies for bioinformatics with applications in biomarker and network discovery
Dissertation Electrical Engineering, Mathematics and Computer Science     2014-06-26    
Author: Hulsman, M.
Promotor: Reinders, M.J.T.
Keywords: data integration · normalization · kernel methods · causal inference · regulatory networks · biomarker discovery · materiomics
[PDF] [Abstract]

2 Scale-space measures for graph topology link protein network architecture to function
Article/Letter to the Editor Electrical Engineering, Mathematics and Computer Science     2014-06-15    
Author: Hulsman, M. · Dimitrakopoulos, C. · De Ridder, J.
[PDF] [Abstract]

3 Evolutionary Optimization of Kernel Weights Improves Protein Complex Comembership Prediction
Article/Letter to the Editor Electrical Engineering, Mathematics and Computer Science     2008-12-18    
Author: Hulsman, M. · Reinders, M.J.T. · De Ridder, D.
Keywords: classifier design and evaluation · biology and genetics · evolutionary computing and genetic algorithms
[PDF] [Abstract]

4 Detecting recurrent gene mutation in interaction network context using multi-scale graph diffusion
Article/Letter to the Editor Electrical Engineering, Mathematics and Computer Science     2013-01-23    
Author: Babaei, S. · Hulsman, M. · Reinders, M.J.T. · De Ridder, J.
Keywords: OA-Fund TU Delft
[PDF] [Abstract]

5 Unbiased Quantitative Models of Protein Translation Derived from Ribosome Profiling Data
Article/Letter to the Editor Electrical Engineering, Mathematics and Computer Science     2015-05-14    
Author: Gritsenko, A.A. · Hulsman, M. · Reinders, M.J.T. · De Ridder, D.
Keywords: OA-Fund TU Delft
[PDF] [Abstract]

6 Switching from a Unicellular to Multicellular Organization in an Aspergillus niger Hypha
Article/Letter to the Editor Applied Sciences     2015-03-03    
Author: Bleichrodt, R.J. · Hulsman, M. · Wösten, H.A.B. · Reinders, A.J.T.
[PDF] [Abstract]

7 Delineation of amplification, hybridization and location effects in microarray data yields better-quality normalization
Article/Letter to the Editor Electrical Engineering, Mathematics and Computer Science     2010-03-26    
Author: Hulsman, M. · Mentink, A. · Van Someren, E.P. · Dechering, K.J. · De Boer, J. · Reinders, M.J.T.
[PDF] [Abstract]

8 Exploring Sequence Characteristics Related to High- Level Production of Secreted Proteins in Aspergillus niger
Article/Letter to the Editor Electrical Engineering, Mathematics and Computer Science     2012-10-01    
Author: Van den Berg, B.A. · Reinders, M.J.T. · Hulsman, M. · Wu, L. · Pel, H.J. · Roubos, J.A. · De Ridder, D.
Keywords: OA-Fund TU Delft
[PDF] [Abstract]

9 Hi-C Chromatin Interaction Networks Predict Co-expression in the Mouse Cortex
Article/Letter to the Editor Electrical Engineering, Mathematics and Computer Science     2015-05-12    
Author: Babaei, S. · Mahfouz, A.M.E.T.A. · Hulsman, M. · Lelieveldt, B.P.F. · De Ridder, J. · Reinders, M.J.T.
Keywords: chromatin · topology · animal performance · mammalian genomics · chromosomes · centrality · chromosome 16 · chromosome mapping · OA-Fund TU Delft
[PDF] [Abstract]

10 Meta-analysis on blood transcriptomic studies identifies consistently coexpressed protein–protein interaction modules as robust markers of human aging
Article/Letter to the Editor Electrical Engineering, Mathematics and Computer Science     2013-11-19    
Author: Van den Akker, E.B. · Passtoors, W.M. · Jansen, R. · Van Zwet, E.W. · Goeman, J.J. · Hulsman, M. · Emilsson, V. · Perola, M. · Willemsen, G. · Penninx, B.W.J.H. · Heijmans, B.T. · Maier, A.B. · Boomsma, D.I. · Kok, J.N. · Slagboom, P.E. · Reinders, M.J.T. · Beekman, M.
Keywords: aging · blood transcriptomics · meta-analysis · network-based analysis · protein–protein interactions
[PDF] [Abstract]

Search results also available in MS Excel format.

Showing 1 to 10 of 10 found. | Sort by date