Pontiella desulfatans gen. Nov., sp. nov., and pontiella sulfatireligans sp. nov., two marine anaerobes of the pontiellaceae fam. nov. producing sulfated glycosaminoglycan-like exopolymers

Pontiella desulfatans gen. Nov., sp. nov., and pontiella sulfatireligans sp. nov., two marine anaerobes of the pontiellaceae fam. nov. producing sulfated glycosaminoglycan-like exopolymers

van Vliet, Daan M. (Wageningen University & Research)
Lin, Y. (TU Delft Environmental Fluid Mechanics)
Bale, Nicole J. (NIOZ Royal Netherlands Institute for Sea Research; Universiteit Utrecht)
Koenen, Michel (NIOZ Royal Netherlands Institute for Sea Research; Universiteit Utrecht)
Villanueva, Laura (NIOZ Royal Netherlands Institute for Sea Research; Universiteit Utrecht)
Stams, Alfons J.M. (Wageningen University & Research; University of Minho)
Sánchez-Andrea, Irene (Wageningen University & Research)

2020

Recently, we isolated two marine strains, F1^T and F21^T, which together with Kiritimatiella glycovorans L21-Fru-AB^T are the only pure cultures of the class Kiritimatiellae within the phylum Verrucomicrobiota. Here, we present an in-depth genome-guided characterization of both isolates with emphasis on their exopolysaccharide synthesis. The strains only grew fermentatively on simple carbohydrates and sulfated polysaccharides. Strains F1^T, F21^T and K. glycovorans reduced elemental sulfur, ferric citrate and anthraquinone-2,6-disulfonate during anaerobic growth on sugars. Both strains produced exopolysaccharides during stationary phase, probably with intracellularly stored glycogen as energy and carbon source. Exopolysaccharides included N-sulfated polysaccharides probably containing hexosamines and thus resembling glycosaminoglycans. This implies that the isolates can both degrade and produce sulfated polysaccharides. Both strains encoded an unprecedently high number of glycoside hydrolase genes (422 and 388, respectively), including prevalent alpha-L-fucosidase genes, which may be necessary for degrading complex sulfated polysaccharides such as fucoidan. Strain F21^T encoded three putative glycosaminoglycan sulfotransferases and a putative sulfate glycosaminoglycan biosynthesis gene cluster. Based on phylogenetic and chemotaxonomic analyses, we propose the taxa Pontiella desulfatans F1^T gen. nov., sp. nov. and Pontiella sulfatireligans F21^T sp. nov. as representatives of the Pontiellaceae fam. nov. within the class Kiritimatiellae.

Black Sea
CAZymes
Glycosaminoglycans
Kiritimatiella
Novel anaerobes

http://resolver.tudelft.nl/uuid:8f91c401-5316-4ac4-952d-2a936dfe4481

https://doi.org/10.3390/microorganisms8060920

Microorganisms, 8 (6), 1-22

Institutional Repository

journal article

© 2020 Daan M. van Vliet, Y. Lin, Nicole J. Bale, Michel Koenen, Laura Villanueva, Alfons J.M. Stams, Irene Sánchez-Andrea