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Dujovne, I. (author), Kerssemakers, J. (author), Capello, G. (author), Dekker, C. (author)We present a novel high-resolution technique for single-molecule experiments, viz., differential traveling wave tracking. This is an interference-based scattering technique where we use gold nanoparticles for high scattering intensities and incorporate differential measurements along one in-plane direction to subtract mechanical noise and drift...journal article 2010
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- van Noort, J. (author), Verbrugge, S. (author), Goosen, N. (author), Dekker, C. (author), Dame, R.T. (author) journal article 2004
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Plesa, C. (author), Van Loo, N. (author), Dekker, C. (author)Nanopore experiments have traditionally been carried out with chloride-based solutions. Here we introduce silver/silver-glutamate-based electrochemistry as an alternative, and study the viscosity, conductivity, and nanopore translocation characteristics of potassium-, sodium-, and lithium-glutamate solutions. We show that it has a linear...journal article 2015
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- van der Heijden, T. (author), van Noort, J. (author), van Leest, H. (author), Kanaar, R. (author), Wyman, C. (author), Dekker, N.H. (author), Dekker, N. (author), Dekker, C. (author) journal article 2005
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- Van der Zant, H.S.J. (author), Mantel, O.C. (author), Heij, C.P. (author), Dekker, C. (author) journal article 1997
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- Dekker, C. (author), Arts, A.F.M. (author), De Wijn, H.W. (author), Van Duyneveldt, A.J. (author), Mydosh, J.A. (author) journal article 1989
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Ristic, D. (author), Modesti, M. (author), Van der Heijden, T. (author), Van Noort, J. (author), Dekker, C. (author), Kanaar, R. (author), Wyman, C. (author)Recombinase proteins assembled into helical filaments on DNA are believed to be the catalytic core of homologous recombination. The assembly, disassembly and dynamic rearrangements of this structure must drive the DNA strand exchange reactions of homologous recombination. The sensitivity of eukaryotic recombinase activity to reaction conditions...journal article
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- van der Heyden, F.H.J. (author), Stein, D. (author), Besteman, K. (author), Lemay, S.G. (author), Dekker, C. (author) journal article 2006
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- Mantel, O.C. (author), Van der Zant, H.S.J. (author), Steinfort, A.J. (author), Traeholt, C. (author), Dekker, C. (author) journal article 1997
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Koster, D.A. (author), Czerwinski, F. (author), Halby, L. (author), Crut, A. (author), Vekhoff, P. (author), Palle, K. (author), Arimondo, P.B. (author), Dekker, N.H. (author)The rate of DNA supercoil removal by human topoisomerase IB (TopIB) is slowed down by the presence of the camptothecin class of antitumor drugs. By preventing religation, these drugs also prolong the lifetime of the covalent TopIB–DNA complex. Here, we use magnetic tweezers to measure the rate of supercoil removal by drugbound TopIB at a single...journal article 2008
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- Janssen, J.W. (author), Lemay, S.G. (author), Kouwenhoven, L.P. (author), Dekker, C. (author) journal article 2002
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- Dekker, C. (author), Arts, A.F.M. (author), De Wijn, H.W. (author) journal article 1988
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- Sapmaz, S. (author), Jarillo-Herrero, P. (author), Blanter, Ya.M. (author), Dekker, C. (author), van der Zant, H.S.J. (author) journal article 2006
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- Dekker, C. (author), Eidelloth, W. (author), Koch, R.H. (author) journal article 1992
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Moolman, M.C. (author), Tiruvadi Krishnan, S. (author), Kerssemakers, J.W.J. (author), Van den Berg, A. (author), Tulinski, P. (author), Depken, M. (author), Reyes-Lamothe, R. (author), Sherratt, D.J. (author), Dekker, N.H. (author)The ubiquitous sliding clamp facilitates processivity of the replicative polymerase and acts as a platform to recruit proteins involved in replication, recombination and repair. While the dynamics of the E. coli ?2-sliding clamp have been characterized in vitro, its in vivo stoichiometry and dynamics remain unclear. To probe both ?2-clamp...journal article 2014
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- Mantel, O.C. (author), Bal, C.A.W. (author), Langezaal, C. (author), Dekker, C. (author), Van der Zant, H.S.J. (author) journal article 1999
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- Dekker, J.P. (author), Van der Put, P.J. (author), Nieuwenhuis, R.R. (author), Veringa, H.J. (author), Schoonman, J. (author) journal article 1991
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Song, B. (author), Schneider, G.F. (author), Xu, Q. (author), Pandraud, G. (author), Dekker, C. (author), Zandbergen, H. (author)Extended abstract of a paper presented at Microscopy and Microanalysis 2011 in Nashville, Tennessee, USA, August 7–August 11, 2011.journal article 2011
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Hertzberger, R. (author), Arents, J. (author), Dekker, H.L. (author), Pridmore, D. (author), Gysler, C. (author), Kleerebezem, M. (author), Teixeira de Mattosa, M.J. (author)Hydrogen peroxide production is a well-known trait of many bacterial species associated with the human body. In the presence of oxygen, the probiotic lactic acid bacterium Lactobacillus johnsonii NCC 533 excretes up to 1 mM H2O2, inducing growth stagnation and cell death. Disruption of genes commonly assumed to be involved in H2O2 production (e...journal article 2014
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- Dekker, M. (author), Tzand, I. (author), Schram, J. (author), Schoonman, J. (author) journal article 1989