"uuid","repository link","title","author","contributor","publication year","abstract","subject topic","language","publication type","publisher","isbn","issn","patent","patent status","bibliographic note","access restriction","embargo date","faculty","department","research group","programme","project","coordinates"
"uuid:e67c0127-4f72-4894-9197-34907d3a1690","http://resolver.tudelft.nl/uuid:e67c0127-4f72-4894-9197-34907d3a1690","Draft genome sequence of Dethiobacter alkaliphilus strain AHT1T, a gram-positive sulfidogenic polyextremophile","Melton, Emily Denise (Vrije Universiteit Amsterdam); Sorokin, Dimitry Y. (TU Delft BT/Environmental Biotechnology; Winogradsky Institute of Microbiology); Overmars, Lex (Vrije Universiteit Amsterdam); Lapidus, Alla L. (St. Petersburg State University); Pillay, Manoj (Lawrence Berkeley National Laboratory); Ivanova, Natalia (Joint Genome Institute); del Rio, Tijana Glavina (Joint Genome Institute); Kyrpides, Nikos C. (Joint Genome Institute; Lawrence Berkeley National Laboratory; King Abdulaziz University); Woyke, Tanja (Joint Genome Institute); Muyzer, Gerard (Vrije Universiteit Amsterdam)","","2017","Dethiobacter alkaliphilus strain AHT1T is an anaerobic, sulfidogenic, moderately salt-tolerant alkaliphilic chemolithotroph isolated from hypersaline soda lake sediments in northeastern Mongolia. It is a Gram-positive bacterium with low GC content, within the phylum Firmicutes. Here we report its draft genome sequence, which consists of 34 contigs with a total sequence length of 3.12 Mbp. D. alkaliphilus strain AHT1T was sequenced by the Joint Genome Institute (JGI) as part of the Community Science Program due to its relevance to bioremediation and biotechnological applications.","Extreme environment; Firmicutes; Gram-positive; Haloalkaliphilic; Sediment; Soda lake","en","journal article","","","","","","","","","","","BT/Environmental Biotechnology","","",""
"uuid:05f66708-64d7-4ab7-8794-1da0e96776de","http://resolver.tudelft.nl/uuid:05f66708-64d7-4ab7-8794-1da0e96776de","Complete genome sequence of Desulfurivibrio alkaliphilus strain AHT2T, a haloalkaliphilic sulfidogen from Egyptian hypersaline alkaline lakes","Melton, Emily Denise (Universiteit van Amsterdam); Sorokin, Dimitry Y. (TU Delft BT/Environmental Biotechnology; Russian Academy of Sciences); Overmars, Lex (Universiteit van Amsterdam); Chertkov, Olga (Los Alamos National Laboratory); Clum, Alicia (Joint Genome Institute); Pillay, Manoj (Lawrence Berkeley National Laboratory); Ivanova, Natalia (Joint Genome Institute); Shapiro, Nicole (Joint Genome Institute); Kyrpides, Nikos C. (King Abdulaziz University; Joint Genome Institute); Woyke, Tanja (Joint Genome Institute); Lapidus, Alla L. (St. Petersburg State University); Muyzer, Gerard (Universiteit van Amsterdam)","","2016","Desulfurivibrio alkaliphilus strain AHT2T is a strictly anaerobic sulfidogenic haloalkaliphile isolated from a composite sediment sample of eight hypersaline alkaline lakes in the Wadi al Natrun valley in the Egyptian Libyan Desert. D. alkaliphilus AHT2T is Gram-negative and belongs to the family Desulfobulbaceae within the Deltaproteobacteria. Here we report its genome sequence, which contains a 3.10 Mbp chromosome. D. alkaliphilus AHT2T is adapted to survive under highly alkaline and moderately saline conditions and therefore, is relevant to the biotechnology industry and life under extreme conditions. For these reasons, D. alkaliphilus AHT2T was sequenced by the DOE Joint Genome Institute as part of the Community Science Program.","Deltaproteobacteria; Sediment; Soda lake; Sulfur cycle; Sulfur disproportionation","en","journal article","","","","","","","","","","","BT/Environmental Biotechnology","","",""
"uuid:c7fb24ef-c9e6-48fa-b57d-defa7be23de1","http://resolver.tudelft.nl/uuid:c7fb24ef-c9e6-48fa-b57d-defa7be23de1","Partial genome sequence of Thioalkalivibrio thiocyanodenitrificans ARhD 1T, a chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium capable of complete denitrification","Berben, Tom (Universiteit van Amsterdam); Sorokin, Dimitry Y. (TU Delft BT/Environmental Biotechnology; Russian Academy of Sciences); Ivanova, Natalia (Joint Genome Institute); Pati, Amrita (Joint Genome Institute); Kyrpides, Nikos (Joint Genome Institute); Goodwin, Lynne A. (Joint Genome Institute); Woyke, Tanja (Joint Genome Institute); Muyzer, Gerard (Universiteit van Amsterdam)","","2015","Thioalkalivibrio thiocyanodenitrificans strain ARhD 1T is a motile, Gram-negative bacterium isolated from soda lakes that belongs to the Gammaproteobacteria. It derives energy for growth and carbon fixation from the oxidation of sulfur compounds, most notably thiocyanate, and so is a chemolithoautotroph. It is capable of complete denitrification under anaerobic conditions. The draft genome sequence consists of 3,746,647 bp in 3 scaffolds, containing 3558 proteincoding and 121 RNA genes. T. thiocyanodenitrificans ARhD 1T was sequenced as part of the DOE Joint Genome Institute Community Science Program.","","en","journal article","","","","","","","","","","","BT/Environmental Biotechnology","","",""