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Zhang, Jinxiong (author), Zhong, Cheng (author), Huang, Yiran (author), Lin, H.X. (author), Wang, Mian (author)
Identifying protein complexes in static protein-protein interaction (PPI) networks is essential for understanding the underlying mechanism of biological processes. Proteins in a complex are co-localized at the same place and co-expressed at the same time. We propose a novel method to identify protein complexes with the features of joint co...
journal article 2019
document
Huang, Yiran (author), Zhong, Cheng (author), Lin, H.X. (author), Wang, Jianyi (author), Peng, Yuzhong (author)
Comparison of metabolic pathways provides a systematic way for understanding the evolutionary and phylogenetic relationships in systems biology. Although a number of phylogenetic methods have been developed, few efforts have been made to provide a unified phylogenetic framework that sufficiently reflects the metabolic features of organisms....
journal article 2018
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Huang, Yiran (author), Zhong, Cheng (author), Lin, H.X. (author), Wang, Jianyi (author)
A fundamental computational problem in metabolic engineering is to find pathways between compounds. Pathfinding methods using atom tracking have been widely used to find biochemically relevant pathways. However, these methods require the user to define the atoms to be tracked. This may lead to failing to predict the pathways that do not...
journal article 2017
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Lee, Ying-Chieh (author), Ko, Chia-Ying (author), Lin, Y. (author), Wang, Chi-Yun (author), Huang, Chun-Wei (author), Seto, Karen C. (author)
Eight East Asian countries are home to approximately one-quarter of the world’s urban population, and by 2050, the combined urban population of these countries is expected to increase to 1.29 billion from 881 million today. Thus a central challenge for East Asian cities is how to pursue more low-carbon urbanization pathways. One of the key...
conference paper 2017
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Menenti, M. (author), Li, X. (author), Wang, J. (author), Vereecken, H. (author), Li, J. (author), Mancini, M. (author), Liu, Q. (author), Jia, L. (author), Li, J. (author), Kuenzer, C. (author), Huang, S. (author), Yesou, H. (author), Wen, J. (author), Kerr, Y. (author), Cheng, X. (author), Gourmelen, N. (author), Ke, C. (author), Ludwig, R. (author), Lin, H. (author), Eineder, M. (author), Ma, Y. (author), Su, Z.B. (author)
Ten Dragon 3 projects deal with hydrologic and cryosphere processes, with a focus on the Himalayas and Qinghai – Tibet Plateau, but not limited to that. At the 1st Dragon 3 Progress Symposium in 2013 a significant potential for a better and deeper integration appeared very clearly and we worked out an overview of the ten projects identifying...
conference paper 2015
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