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Rebnegger, C. (author), Vos, T. (author), Graf, Alexandra B. (author), Valli, Minoska (author), Pronk, J.T. (author), Daran-Lapujade, P.A.S. (author), Mattanovicha, Diethard (author)
The yeast Pichia pastoris is a widely used host for recombinant protein production. Understanding its physiology at extremely low growth rates is a first step in the direction of decoupling product formation from cellular growth and therefore of biotechnological relevance. Retentostat cultivation is an excellent tool for studying microbes at...
journal article 2016
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Yang, J. (author), Poot, D.H.J. (author), Caan, Matthan WA (author), Su, Tanja (author), Majoie, Charles BLM (author), van Vliet, L.J. (author), Vos, F.M. (author)
Purpose
This paper presents and studies a framework for reliable modeling of diffusion MRI using a data-acquisition adaptive prior.

Methods
Automated relevance determination estimates the mean of the posterior distribution of a rank-2 dual tensor model exploiting Jeffreys prior (JARD). This data-acquisition prior is based on the...
journal article 2016
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Schoemaker, M.A. (author), Verlaan, J.G. (author), Vos, R (author), Kok, M. (author)
In many parts of the world, flooding is a big risk. There are numerous strategies to reduce flood risk. The amount of flood risk reduction strategies grows exponentially with the amount of possible measures that can be implemented and possible timings when measures can be implemented. In this paper, the use of a financial method called ...
conference paper 2016
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Pelkmans, Jordi F. (author), Vos, A.M. (author), Scholtmeijer, Karin (author), Hendrix, Ed (author), Baars, Johan J.P. (author), Gehrmann, T. (author), Reinders, M.J.T. (author), Lugones, Luis G. (author), Wösten, Han A.B. (author)
The Cys2His2 zinc finger protein gene c2h2 of Schizophyllum commune is involved in mushroom formation. Its inactivation results in a strain that is arrested at the stage of aggregate formation. In this study, the c2h2 orthologue of Agaricus bisporus was over-expressed in this white button mushroom forming basidiomycete using Agrobacterium...
journal article 2016
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Zhang, T. (author), Li, Z. (author), Runge, Jurgen H. (author), Lavini, Cristina (author), Stoker, Jaap (author), Van Gulik, Thomas (author), van Vliet, L.J. (author), Vos, F.M. (author)
In Dynamic Contrast-Enhanced MRI (DCE-MRI) of the liver, a series of images is acquired over a period of 20 minutes. Due to the patient's breathing, the liver is subject to a substantial displacement between acquisitions. Furthermore, due to its location in the abdomen, the liver also undergoes marked deformation. The large deformations...
conference paper 2016
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Peruzzini, D. (author), Viti, J. (author), Tortoli, P. (author), Verweij, M.D. (author), De Jong, N. (author), Vos, H.J. (author)
Currently, in medical ultrasound contrast agent (UCA) imaging the second harmonic scattering of the microbubbles is regularly used. This scattering is in competition with the signal that is caused by nonlinear wave propagation in tissue. It was reported that UCA imaging based on the third or higher harmonics, i.e. “superharmonic” imaging, shows...
conference paper 2015
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Li, Z. (author), Van Vliet, L.J. (author), Stoker, J. (author), Vos, F.M. (author)
Image registration of medical images in the presence of large intra-image signal fluctuations is a challenging task. Our paper addresses this problem by introducing a new concept based on the structure tensor of the local phase. The local phase is calculated from the monogenic signal representation of the images. The local phase image is hardly...
conference paper 2015
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Vos, T. (author), De la Torre Cortes, P. (author), Van Gulik, W.M. (author), Pronk, J.T. (author), Daran-Lapujade, P.A.S. (author)
Introduction: Saccharomyces cerevisiae has become a popular host for production of non-native compounds. The metabolic pathways involved generally require a net input of energy. To maximize the ATP yield on sugar in S. cerevisiae, industrial cultivation is typically performed in aerobic, sugar-limited fed-batch reactors which, due to constraints...
journal article 2015
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Wever, R. (author), Schermer, R. (author), Smit, L. (author), Vos, L. (author)
Besides contributing to the actual sustainability performance of a product-packaging combination, packaging can also play a role in communicating about sustainability. Such green marketing aspects of packaging may either focus on the sustainability credentials of the packaging itself, or on the credentials of the product contained (or even the...
conference paper 2015
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Camfferman, F.A. (author), Ecury-Goossen, G.M. (author), La Roche, J.E. (author), De Jong, N. (author), Van 't Leven, W. (author), Vos, H.J. (author), Verweij, M.D. (author), Nasserinejad, K. (author), Cools, F. (author), Govaert, P. (author), Dudink, J. (author)
Introduction: Preterm infants are born during critical stages of brain development, in which the adaptive capacity of the fetus to extra-uterine environment is limited. Inadequate brain perfusion has been directly linked to preterm brain damage. Advanced high-frequency ultrasound probes and processing algorithms allow visualization of...
journal article 2015
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Elmendorp, R.J.M. (author), Vos, R. (author), La Rocca, G. (author)
A design method is presented that has been implemented in a software program to investigate the merits of conventional and unconventional transport airplanes. Design and analysis methods are implemented in a design tool capable of creating a conceptual design based on a set of toplevel requirements. In contrast to established design methods,...
conference paper 2014
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Kreutzberger, E.D. (author), Konings, J.W. (author), Meijer, S. (author), Witteveen, C. (author), Meijers, B.M. (author), Pekin, E. (author), Macharis, C. (author), Kiel, J. (author), Kawabata, Y. (author), Vos, W. (author)
This report is the first deliverable of the project Intermodal Rail Freight Twin Hub Network Northwest Europe. We call its subject Twin hub network and the organisational entity to carry out the actions the Twin hub project. The project is funded by INTERREG NWE (programme IVb). Its work started in December 2011 and will end by the end of 2015....
report 2014
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Klein, R. (author), Brust, S. (author), Brown, M. (author), Vos, R. (author)
To design a high-altitude long-endurance UAV to fly a twenty-hour reconnaissance mission at an altitude of 80,000ft, was the assignment for this year’s undergraduate design competition. The competition was organized by the American Institute of Aeronautics and Astronautics (AIAA). Three students from Delft demonstrated superior design skills,...
journal article 2013
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Kuijpers, N.G.A. (author), Chroumpi, S. (author), Vos, T. (author), Solis-Escalante, D. (author), Bosman, D. (author), Pronk, J.T. (author), Daran, J.G. (author), Daran-Lapujade, P.A.S. (author)
In vivo assembly of overlapping fragments by homologous recombination in Saccharomyces cerevisiae is a powerful method to engineer large DNA constructs. Whereas most in vivo assembly methods reported to date result in circular vectors, stable integrated constructs are often preferred for metabolic engineering as they are required for large-scale...
journal article 2013
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Vos, R. (author), Hoogreef, M.F.M. (author)
This paper presents a semi-analytical method for the weight estimation of fuselages with an oval cross-section, applied to blended wing body aircraft. The weight estimation of the fuselage primary structure is based on a structural analysis of two-dimensional crosssections and it is completed by a set of empirical relations for the weight...
conference paper 2013
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De Groot, M. (author), Vernooij, M.W. (author), Klein, S. (author), Arfan Ikram, M. (author), Vos, F.M. (author), Smith, S.M. (author), Niessen, W.J. (author), Andersson, J.L.R. (author)
Anatomical alignment in neuroimaging studies is of such importance that considerable effort is put into improving the registration used to establish spatial correspondence. Tract-based spatial statistics (TBSS) is a popular method for comparing diffusion characteristics across subjects. TBSS establishes spatial correspondence using a combination...
journal article 2013
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Melles, M. (author), Erasmus, V. (author), van Loon, M. (author), Tassoul, M. (author), van Beeck, E.F. (author), Vos, M.C. (author)
conference paper 2013
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Pfaff, W. (author), Vos, A. (author), Hanson, R. (author)
Metal nanostructures can be used to harvest and guide the emission of single photon emitters on-chip via surface plasmon polaritons. In order to develop and characterize photonic devices based on emitter-plasmon hybrid structures, a deterministic and scalable fabrication method for such structures is desirable. Here, we demonstrate deterministic...
journal article 2013
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Tielbeek, J.A.W. (author), Vos, F.M. (author), Stoker, J. (author)
Magnetic resonance imaging is increasingly used for abdominal evaluation and is more and more considered as the optimal imaging technique for detection of mural inflammation in patients with Crohn’s disease. Grading the disease activity is important in daily clinical practice to monitor the medical treatment and is assessed by evaluating...
journal article 2012
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Vos, R. (author), Van Dommelen, J. (author)
This paper details a new software tool to aid in the conceptual design of blended-wingbody aircraft. The tool consists of four main modules. In the preliminary sizing model a class I estimate of the maximum take-off weight, wing loading, and thrust-to-weight ratio is calculated. This information is used together with an initial guess of the 30...
conference paper 2012
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