Searched for: author%3A%22Kim%2C+E.%22
(1 - 14 of 14)
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Schouten, A.M. (author), Flipse, S.M. (author), van Nieuwenhuizen, Kim E. (author), Jansen, F.W. (author), van der Eijk, A.C. (author), van den Dobbelsteen, J.J. (author)
Literature proposes numerous initiatives for optimization of the Operating Room (OR). Despite multiple suggested strategies for the optimization of workflow on the OR, its patients and (medical) staff, no uniform description of ‘optimization’ has been adopted. This makes it difficult to evaluate the proposed optimization strategies. In...
review 2023
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van Oorschot, Kim E. (author), Akkermans, Henk A. (author), Van Wassenhove, Luk N. (author), Wang, Y. (author)
Purpose: Due to the complexity of digital services, companies are increasingly forced to offer their services “in permanent beta”, requiring continuous fine-tuning and updating. Complexity makes it extremely difficult to predict when and where the next service disruption will occur. The authors examine what this means for performance measurement...
journal article 2022
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Pradhan, B. (author), Barth, R. (author), Kim, E. (author), van Laar, T. (author), Yang, W.W.W. (author), Ryu, J.K. (author), van der Torre, J. (author), Peters, Jan Michael (author), Dekker, C. (author)
Ring-shaped structural maintenance of chromosomes (SMC) complexes like condensin and cohesin extrude loops of DNA. It remains, however, unclear how they can extrude DNA loops in chromatin that is bound with proteins. Here, we use in vitro single-molecule visualization to show that nucleosomes, RNA polymerase, and dCas9 pose virtually no...
journal article 2022
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Kim, E. (author), Martin Gonzalez, A. (author), Pradhan, B. (author), van der Torre, J. (author), Dekker, C. (author)
Condensin, a structural maintenance of chromosomes (SMC) complex, has been shown to be a molecular motor protein that organizes chromosomes by extruding loops of DNA. In cells, such loop extrusion is challenged by many potential conflicts, for example, the torsional stresses that are generated by other DNA-processing enzymes. It has so far...
journal article 2022
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Kim, E. (author), Park, Ji Won (author), Noh, Jin Hyung (author), Bae, Young Ho (author), Maeng, Sung Kyu (author)
Since 2021, national standards of South Korea for industrial wastewater discharge to surface water have changed from chemical oxygen demand to total organic carbon for the organic matter. Conventional organic matter parameters (e.g., biochemical oxygen demand, chemical oxygen demand and total organic carbon) are limited means of understanding...
journal article 2022
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Hulleman, C.N. (author), Thorsen, R.O. (author), Kim, E. (author), Dekker, C. (author), Stallinga, S. (author), Rieger, B. (author)
Estimating the orientation and 3D position of rotationally constrained emitters with localization microscopy typically requires polarization splitting or a large engineered Point Spread Function (PSF). Here we utilize a compact modified PSF for single molecule emitter imaging to estimate simultaneously the 3D position, dipole orientation, and...
journal article 2021
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Ryu, J.K. (author), Bouchoux, Céline (author), Liu, Hon Wing (author), Kim, E. (author), Minamino, Masashi (author), de Groot, Ralph (author), Katan, A.J. (author), Bonato, Andrea (author), Marenduzzo, Davide (author), Michieletto, Davide (author), Uhlmann, Frank (author), Dekker, C. (author)
Structural maintenance of chromosome (SMC) protein complexes are able to extrude DNA loops. While loop extrusion constitutes a fundamental building block of chromosomes, other factors may be equally important. Here, we show that yeast cohesin exhibits pronounced clustering on DNA, with all the hallmarks of biomolecular condensation. DNA...
journal article 2021
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Kim, E. (author), Ćurko, Josip (author), Gajdoš Kljusurić, Jasenka (author), Matošić, Marin (author), Crnek, Vlado (author), López-Vázquez, Carlos M. (author), Garcia, H. (author), Brdjanovic, Damir (author), Valinger, Davor (author)
The use of near-infrared (NIR) spectroscopy in wastewater treatment has continuously expanded. As an alternative to conventional analytical methods for monitoring constituents in wastewater treatment processes, the use of NIR spectroscopy is considered to be cost-effective and less time-consuming. NIR spectroscopy does not distort the...
journal article 2021
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Kim, E. (author), Kerssemakers, J.W.J. (author), Shaltiel, Indra A. (author), Haering, Christian H. (author), Dekker, C. (author)
Condensin, a key component of the structure maintenance of chromosome (SMC) protein complexes, has recently been shown to be a motor that extrudes loops of DNA<sup>1</sup>. It remains unclear, however, how condensin complexes work together to collectively package DNA into chromosomes. Here we use time-lapse single-molecule visualization to...
journal article 2020
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Elbatsh, Ahmed M.O. (author), Kim, E. (author), Eeftens, J.M. (author), Raaijmakers, Jonne A. (author), van der Weide, Robin H. (author), García-Nieto, Alberto (author), Bravo, Sol (author), Ganji, M. (author), Dekker, C. (author)
Condensin is a conserved SMC complex that uses its ATPase machinery to structure genomes, but how it does so is largely unknown. We show that condensin's ATPase has a dual role in chromosome condensation. Mutation of one ATPase site impairs condensation, while mutating the second site results in hyperactive condensin that compacts DNA faster...
journal article 2019
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Kim, S.H. (author), Ganji, M. (author), Kim, E. (author), van der Torre, J. (author), Abbondanzieri, E. (author), Dekker, C. (author)
The three-dimensional organization of DNA is increasingly understood to play a decisive role in vital cellular processes. Many studies focus on the role of DNA-packaging proteins, crowding, and confinement in arranging chromatin, but structural information might also be directly encoded in bare DNA itself. Here, we visualize plectonemes ...
journal article 2018
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Ganji, M. (author), Shaltiel, Indra A. (author), Bisht, Shveta (author), Kim, E. (author), Kalichava, A. (author), Haering, Christian H. (author), Dekker, C. (author)
It has been hypothesized that SMC protein complexes such as condensin and cohesin spatially organize chromosomes by extruding DNA into large loops. We directly visualized the formation and processive extension of DNA loops by yeast condensin in real time. Our findings constitute unambiguous evidence for loop extrusion. We observed that a...
journal article 2018
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Kim, E. (author)
This is the brand-dedicated building. When the fashion brand desires to promote their brand image, architects realize it as a space. With many informations of the fashion brand, Givenchy, the architect makes a process of how to make the special, and attractive building of brand.
master thesis 2011
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Kim, E. (author)
The objective of this study was to contribute to the knowledge on ice-ridges structures interactions. This work is a follow-up of previous research on simulations of ice-structure interaction using finite element method (Gürtner, 2009b; Konuk, et al., 2009a,b) and a preliminary study of freeze-bond (FB) shear strength (Repetto-Llamazares, et al....
master thesis 2009
Searched for: author%3A%22Kim%2C+E.%22
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