Searched for: author%3A%22L%C3%A9vy%2C+Jonathan%22
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Ahmed, N. (author), Lévy, Jonathan (author), Ren, S. (author), Mushtaq, Hamid (author), Bertels, K.L.M. (author), Al-Ars, Z. (author)
Following publication of the original article [1], the author requested changes to the figures 4, 7, 8, 9, 12 and 14 to align these with the text. The corrected figures are supplied below. The original article [1] has been corrected. [Typesetter, please insert new supplied figure in package].
journal article 2019
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Ahmed, N. (author), Lévy, Jonathan (author), Ren, S. (author), Mushtaq, Hamid (author), Bertels, K.L.M. (author), Al-Ars, Z. (author)
BACKGROUND: Due the computational complexity of sequence alignment algorithms, various accelerated solutions have been proposed to speedup this analysis. NVBIO is the only available GPU library that accelerates sequence alignment of high-throughput NGS data, but has limited performance. In this article we present GASAL2, a GPU library for...
journal article 2019
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Lévy, Jonathan (author)
DNA aligning is a compute-intensive and time-consuming task required for all further DNA processing. It consists in finding for each DNA string from a sample its location in a reference genome. Usual techniques for short reads (hundreds of bases) involve seed-extension, where a small matching seed is found with quick search through FM-index and...
master thesis 2019