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1 Time series analysis of benzo[a]pyrene-induced transcriptome changes suggests that a network of transcription factors regulates the effects on functional gene sets
article 2010    
Author: Delft, J.H.M. van · Mathijs, K. · Staal, Y.C.M. · Herwijnen, M.H.M. van · Brauers, K.J.J. · Boorsma, A. · Kleinjans, J.C.S.
Keywords: Nutrition · Biomedical Research · Carcinogen · Network · Time series · Transcription factor · Transcriptome · benzo[a]pyrene · immunoglobulin enhancer binding protein · Myc protein · serum response factor · transcription factor · transcription factor AP 1 · transcription factor E2F1 · transcriptome · amino acid metabolism · apoptosis · article · carcinogenesis · cell cycle G1 phase · cell cycle S phase · controlled study · correlation analysis · DNA adduct · DNA repair · down regulation · functional genomics · gene expression · gene regulatory network · hepatoma cell · human · human cell · lipid metabolism · named inventories, questionnaires and rating scales · proto oncogene · Short Time series Expression Miner · signal transduction · time series analysis · transcription regulation · tumor suppressor gene · upregulation
[Abstract]

2 Interlaboratory and interplatform comparison of microarray gene expression analysis of HepG2 cells exposed to benzo(a)pyrene
article 2009    
Author: Hockley, S.L. · Mathijs, K. · Staal, Y.C.M. · Brewer, D. · Giddings, I. · Delft, J.H.M. van · Phillips, D.H.
Keywords: Biology · Toxicology and Applied Pharmacology · benzo[a]pyrene · RNA · article · cell strain HepG2 · correlation analysis · data analysis · DNA microarray · false negative result · gene expression profiling · human · human cell · intermethod comparison · laboratory · microarray analysis · nucleotide sequence · principal component analysis · priority journal · quantitative assay · real time polymerase chain reaction · transcriptomics · validation process
[Abstract]

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