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1 Interactomics in the human intestine: Lactobacilli and Bifidobacteria make a difference.
article 2008    
Author: Boesten, R.J. · Vos, W.M.de
Keywords: Health · Gene expression profiling · Genetics · Human · Metabolism · Microbiology · Animals · Bacterial Proteins · Bifidobacterium · Colon · Gene Expression Profiling · Humans · Ileum · Lactobacillus · Mice · Proteins
[Abstract]

2 Comprehensive analysis of the metabolome of Pseudomonas putida S12 grown on different carbon sources
article 2008    
Author: Werf, M.J. van der · Overkamp, K.M. · Muilwijk, B. · Koek, M.M. · Werff van der - Vat, B.J.C. van der · Jellema, R.H. · Coulier, L. · Hankemeier, T.
Keywords: Biology · carbon · article · drug effect · energy metabolism · gene expression profiling · gene expression regulation · genetics · genomics · metabolism · Pseudomonas putida · reproducibility · Carbon · Energy Metabolism · Gene Expression Profiling · Gene Expression Regulation, Bacterial · Genomics · Metabolism · Pseudomonas putida · Reproducibility of Results · Pseudomonas putida
[Abstract]

3 Lactobacillus plantarum NCIMB8826 ameliorates inflammation of colon and skin in human APOC1 transgenic mice
article 2016    
Author: Mariman, R. · Reefman, E. · Tielen, F. · Persoon-Deen, C. · Mark, K. van de · Worms, N. · Koning, F. · Nagelkerken, L.
Keywords: Biology · APOC1+/+ transgenic mice model · Gene expression profiling · Intestine · Mast cells · Probiotics · Biomedical Innovation · Healthy Living · Life · MHR - Metabolic Health Research · ELSS - Earth, Life and Social Sciences
[Abstract]

4 Bioinformatics Methods for Interpreting Toxicogenomics Data: The Role of Text-Mining
bookPart 2014    
Author: Hettne, K.M. · Kleinjans, J. · Stierum, R.H. · Boorsma, A. · Kors, J.A.
Keywords: Biology · Bioinformatics · Gene-expression profiling · Gene-set analysis · Text-mining · Biomedical Innovation · Healthy Living · Life · MSB - Microbiology and Systems Biology · ELSS - Earth, Life and Social Sciences
[Abstract]

5 The introduction of toxicogenomics; potential new markers of hepatotoxicity.
article 2005    
Author: Heijne, W.H. · Stierum, R.H. · Leeman, W.R. · Ommen, B. van
Keywords: Toxicology · Physiological Sciences · biological marker · drug · animal · biological model · chemically induced disorder · drug toxicity · gene expression profiling · genetics · human · liver disease · methodology · review · toxicogenetics · toxicology · Animals · Biological Markers · Drug Toxicity · Gene Expression Profiling · Humans · Liver Diseases · Models, Biological · Pharmaceutical Preparations · Toxicogenetics · Toxicology

6 Discovering gene expression patterns in time course microarray experiments by ANOVA-SCA
article 2007    
Author: Nueda, M.J. · Conesa, A. · Westerhuis, J.A. · Hoefsloot, H.C.J. · Smilde, A.K. · Talón, M. · Ferrer, A.
Keywords: Biology · Analytical research · analysis of variance · article · bioinformatics · correlation analysis · data base · gene expression profiling · genetic selection · genetic transcription · mathematical analysis · microarray analysis · nonhuman · priority journal · simultaneous component analysis · statistical analysis · time series analysis · Algorithms · Analysis of Variance · Computational Biology · Computer Simulation · Data Interpretation, Statistical · Gene Expression Profiling · Models, Genetic · Models, Statistical · Oligonucleotide Array Sequence Analysis · Principal Component Analysis · Time Factors · Transcription, Genetic
[Abstract]

7 A toxicogenomics-based parallelogram approach to evaluate the relevance of coumarin-induced responses in primary human hepatocytes in vitro for humans in vivo
article 2009    
Author: Kienhuis, A.S. · Poll, M.C.G. van de · Jong, C.H.C. de · Gottschalk, R. · Herwijnen, M. van · Boorsma, A. · Kleinjans, J.C.S. · Stierum, R.H. · Delft, J.H.M. van
Keywords: Biology · Biomedical Research · Coumarin · Gene expression profiling · Hepatotoxicity · Parallelogram approach · Primary human hepatocytes · Species difference · Toxicogenomics · Coumarin · Adult · Aged · Blood clotting · Concentration response · Controlled study · Disorders of mitochondrial functions · Down regulation · Energy consumption · Female · Gene expression profiling · Genomics · Human · Human cell · Liver cell · Liver toxicity · Male · Species difference · Toxicogenetics · Transcriptomics · Animalia · Rattus
[Abstract]

8 A sandwich-cultured rat hepatocyte system with increased metabolic competence evaluated by gene expression profiling
article 2007    
Author: Kienhuis, A.S. · Wortelboer, H.M. · Maas, W.J. · Herwijnen, M. van · Kleinjans, J.C.S. · Delft, J.H.M. van · Stierum, R.H.
Keywords: Biology · Biomedical Research · Gene expression profiling · In vitro models · Metabolic competence · Primary rat hepatocytes · Sandwich-culture · beta naphthoflavone · cytochrome P450 · dexamethasone · phenobarbital · animal cell · article · cell culture · culture medium · enzyme activity · gene expression · gene expression profiling · in vitro study · in vivo study · liver · liver cell · male · metabolic capacity · model · nonhuman · nucleotide sequence · rat · Actins · Animals · Biotransformation · Cytochrome P-450 Enzyme System · Cytological Techniques · Data Interpretation, Statistical · Gene Expression Profiling · Hepatocytes · Hydroxylation · Male · Nucleic Acid Hybridization · Oligonucleotide Array Sequence Analysis · Rats · Rats, Wistar · Reverse Transcriptase Polymerase Chain Reaction · RNA · Testosterone · Rattus
[Abstract]

9 Analysis of temporal gene expression during Bacillus subtilis spore germination and outgrowth
article 2007    
Author: Keijser, B.J.F. · Beek, A. ter · Rauwerda, H. · Schuren, F. · Montijn, R. · Spek, H. van der · Brul, S.
Keywords: Biology · Biotechnology · Cell division · Cell growth · DNA repair · DNA replication · Microscopy · Spore germination · Sporogenesis · Transcription regulation · Bacillus subtilis · Gene Expression · Gene Expression Profiling · Oligonucleotide Array Sequence Analysis · RNA, Bacterial · RNA, Messenger · Spores, Bacterial · Time Factors · Transcription, Genetic · Bacillus subtilis
[Abstract]

10 Unravelling the multiple effects of lactic acid stress on Lactobacillus plantarum by transcription profiling
article 2005    
Author: Pieterse, B. · Leer, R.J. · Schuren, F.H.J. · Werf, M.J. van der
Keywords: Biology · Biotechnology · lactic acid · article · bacterial genome · bacterial growth · concentration (parameters) · controlled study · culture medium · DNA microarray · gene expression profiling · gene identification · gene sequence · genetic code · genetic transcription · growth rate · lactic acid bacterium · Lactobacillus plantarum · nonhuman · nucleotide sequence · open reading frame · osmolarity · priority journal · RNA isolation · steady state · Bioreactors · Fermentation · Gene Expression Profiling · Gene Expression Regulation, Bacterial · Genes, Bacterial · Hydrogen-Ion Concentration · Lactic Acid · Lactobacillus plantarum · Transcription, Genetic · Bacteria (microorganisms) · Lactobacillus plantarum
[Abstract]

11 Transcriptome analysis of a phenol-producing Pseudomonas putida S12 construct: Genetic and physiological basis for improved production
article 2008    
Author: Wierckx, N.J.P. · Ballerstedt, H. · Bont, J.A.M.de · Winde, J.H.de · Ruijssenaars, H.J. · Wery, J.
Keywords: Biology · Biomedical Research · lyase · phenol · tryptophan · tyrosine · amino acid synthesis · article · bacterial gene · bacterial metabolism · bacterial mutation · bacterium mutant · bioaccumulation · biosynthesis · gene disruption · gene expression profiling · gene expression regulation · gene identification · gene targeting · nonhuman · nucleotide sequence · priority journal · Pseudomonas putida · sequence analysis · transcriptomics · Gene Deletion · Gene Expression Profiling · Metabolic Networks and Pathways · Mutagenesis, Insertional · Phenol · Phenylpyruvic Acids · Pseudomonas putida · Tryptophan · Tyrosine · Tyrosine Phenol-Lyase · Up-Regulation · Pseudomonas putida
[Abstract]

12 Genomic analysis suggests higher susceptibility of children to air pollution
article 2008    
Author: Leeuwen, D.M. van · Pedersen, M. · Hendriksen, P.J.M. · Boorsma, A. · Herwijnen, M.H.M. van · Gottschalk, R.W.H. · Kirsch-Volders, M. · Knudsen, L.E. · Šrám, R.J. · Bajak, E. · Delft, J.H.M. van · Kleinjans, J.C.S.
Keywords: Health · Physiological Sciences · transcriptome · adult · air pollution · article · blood analysis · cancer risk · cancer susceptibility · child · child health · controlled study · Czech Republic · data analysis · environmental exposure · environmental health · female · gene expression · gene expression profiling · genomics · human · immune response · male · micronucleus · nucleosome · parent · priority journal · Adult · Air Pollution · Child · Czech Republic · Female · Gene Expression Profiling · Gene Expression Regulation · Genetic Predisposition to Disease · Humans · Male · Nuclear Family · Parents · Receptors, Chemokine · RNA · RNA Splicing
[Abstract]

13 Bromobenzene-induced hepatotoxicity at the transcriptome level
article 2004    
Author: Heijne, W.H.M. · Slitt, A.L. · Bladeren, P.J. van · Groten, J.P. · Klaassen, C.D. · Stierum, R.H. · Ommen, B. van
Keywords: Biology Toxicology · Physiological Sciences · Bromobenzene · cDNA microarray · Hepatotoxicity · Rat · Toxicogenomics · Transcriptomics · Bromobenzene · Cholesterol · Complementary DNA · Cytochrome P450 4A · Fatty acid · Glutathione · Messenger RNA · Metallothionein · Protein · Sterol · Acute phase response · Animal experiment · Animal model · Animal tissue · Cell communication · Cholesterol metabolism · Concentration response · Controlled study · Cytoskeleton · DNA determination · DNA microarray · DNA responsive element · Drug metabolism · Electron · Fatty acid metabolism · Gene amplification · Gene expression profiling · Gene rearrangement · Liver toxicity · Nonhuman · Nucleotide sequence · Oxidative stress · Protein depletion · Protein metabolism · Protein synthesis · Rat · Signal transduction · Transcription regulation · Animals · Bromobenzenes · Gene Expression Profiling · Gene Expression Regulation · Glutathione · Hepatitis, Toxic · Liver · Male · Microarray Analysis · Oligonucleotide Array Sequence Analysis · Rats · Rats, Inbred Strains · Time Factors · Transcription, Genetic
[Abstract]

14 Molecular characterization of trimellitic anhydride-induced respiratory allergy in Brown Norway rats
article 2008    
Author: Kuper, C.F. · Heijne, W.H. · Dansen, M. · Verhoeckx, K.C. · Boorsma, A. · Radonjic, M. · Bruijntjes, J. · Stierum, R. · Muijser, H. · Arts, J.H.
Keywords: Biology · Toxicology and Applied Pharmacology · Allergen · Immunoglobulin E · Phthalic anhydride · Toll like receptor · Trimellitic anhydride · Analysis of variance · Animal · Article · Blood · Brown Norway rat · Cluster analysis · DNA microarray · Drug effect · Female · Gene expression profiling · Genetics · Immunohistochemistry · Lung · Lung lavage · Metabolism · Nonparametric test · Pathology · Principal component analysis · Proteomics · Rat · Respiratory tract allergy · Signal transduction · Allergens · Analysis of Variance · Animals · Bronchoalveolar Lavage · Cluster Analysis · Female · Gene Expression Profiling · Immunoglobulin E · Immunohistochemistry · Lung · Oligonucleotide Array Sequence Analysis · Phthalic Anhydrides · Principal Component Analysis · Proteomics · Rats · Rats, Inbred BN · Respiratory Hypersensitivity · Signal Transduction · Statistics, Nonparametric · Toll-Like Receptors
[Abstract]

15 High-protein and high-carbohydrate breakfasts differentially change the transcriptome of human blood cells
article 2006    
Author: Erk, M.J. van · Blom, W.A.M. · Ommen, B. van · Hendriks, H.F.J.
Keywords: Nutrition · Biomedical Research · Acetaminophen · Carbohydrate · Gene expression · Human blood · Leukocytes · Protein · immunoglobulin enhancer binding protein · paracetamol · T lymphocyte receptor · adult · article · blood cell · blood sampling · carbohydrate diet · food intake · gene expression profiling · gene overexpression · glycogen metabolism · human · human experiment · immune response · leukocyte · male · normal human · protein diet · protein synthesis · signal transduction · stomach emptying · Acetaminophen · Adolescent · Adult · Cross-Over Studies · Dietary Carbohydrates · Dietary Proteins · Eating · Gastric Emptying · Gene Expression · Gene Expression Profiling · Gene Expression Regulation · Humans · Leukocytes · Male · NF-kappa B · Oligonucleotide Array Sequence Analysis · Receptors, Antigen, T-Cell · RNA · Satiation · Signal Transduction · Single-Blind Method
[Abstract]

16 Molecular changes in the degenerated goat intervertebral disc
article 2008    
Author: Hoogendoorn, R. · Doulabi, B.Z. · Huang, C.L. · Wuisman, P.I. · Bank, R.A. · Helder, M.N.
Keywords: Biomedical Research · Animal model · Biochemical composition · Disc degeneration · Gene expression · aggrecan · chondroitin ABC lyase · collagen · collagen type 1 · collagen type 2 · collagenase 3 · glycosaminoglycan · hydroxyproline · metalloproteinase · pyridinoline · thrombospondin · scleroprotein · animal experiment · animal model · article · cross linking · disease severity · female · gene expression · gene sequence · goat · intervertebral disk · intervertebral disk degeneration · nonhuman · priority journal · protein motif · animal · comparative study · disease model · gene expression profiling · genetics · lumbar vertebra · metabolism · methodology · pathology · physiology · spine disease · Animals · Collagen · Disease Models, Animal · Extracellular Matrix Proteins · Female · Gene Expression Profiling · Goats · Intervertebral Disk · Lumbar Vertebrae · Spinal Diseases
[Abstract]

17 Modulation of the cytokine network in human adult astrocytes by human herpesvirus-6A
article 2005    
Author: Meeuwsen, S. · Persoon-Deen, C. · Bsibsi, M. · Bajramovic, J.J. · Ravid, R. · Bolle, L. de · Noort, J.M. van
Keywords: Astrocytes · Cytokines · Gene profiling · HHV-6 · Inflammation · chemokine · chemotactic factor · growth factor · growth factor receptor · interleukin 10 · interleukin 11 · aged · controlled study · cytokine production · female · gene expression profiling · human cell · human cell culture · Human herpesvirus 6 · human tissue · immune response · immunomodulation · inflammation · nucleotide sequence · priority journal · protein expression · unindexed sequence · virus infection · Astrocytes · Brain · Cells, Cultured · Cytokines · Gene Expression Profiling · Gene Expression Regulation · Glial Fibrillary Acidic Protein · Growth Substances · Herpesvirus 6, Human · Humans · Indoles · Models, Biological · Receptors, Cytokine · Receptors, Growth Factor · Regression Analysis · T-Lymphocytes
[Abstract]

18 Defining best practice for microarray analyses in nutrigenomic studies
article 2005    
Author: Garosi, P. · Filippo, C. de · Erk, M. van · Rocca-Serra, P. · Sansone, S.A. · Elliott, R.
Keywords: Nutrition · Biomedical Research · Experimental design · Microarrays · Standardisation · Statistical analysis · diet · image analysis · microarray analysis · nutrigenomics · nutrition · RNA extraction · standardization · statistical analysis · animal · DNA microarray · image processing · methodology · Animals · Data Interpretation, Statistical · Gene Expression Profiling · Genome · Humans · Image Processing, Computer-Assisted · Nutrition Physiology · Oligonucleotide Array Sequence Analysis
[PDF] [Abstract]

19 Analysis of longitudinal metabolomics data
article 2004    
Author: Jansen, J.J. · Hoefsloot, H.C.J. · Boelens, H.F.M. · Greef, J. van der · Smilde, A.K.
Keywords: Research · Analytical research · Algorithm · Analytic method · Analytical error · Computer program · Controlled study · Female · Male · Mathematical computing · Metabolic regulation · Nonhuman · Nuclear magnetic resonance · Principal component analysis · Priority journal · Rhesus monkey · Scoring system · Urinalysis · Algorithms · Animals · Computer Simulation · Gene Expression Profiling · Macaca mulatta · Magnetic Resonance Spectroscopy · Models, Biological · Principal Component Analysis · Protein Interaction Mapping · Proteins · Signal Transduction · Time Factors · Urinalysis
[Abstract]

20 Endogenous collagen influences differentiation of human multipotent mesenchymal stromal cells
article 2010    
Author: Fernandes, H. · Mentink, A. · Bank, R. · Stoop, R. · Blitterswijk, C. van · Boer, J. de
Keywords: Biology · Biomedical Research · Adipogenesis · Adipogenic · Ascorbic acids · Bone formation · Chondrogenesis · Chondrogenic · Collagen synthesis · Collagen type I · Collagenous matrix · Expansion phase · Extracellular matrices · Gene expression profiling · In-line · In-vitro · In-vivo · Matrix remodeling · Mesenchymal stromal cells · Multipotent cells · Osteoclastogenesis · Osteogenesis · Osteogenic · Proliferation rate · Stem cell · Cell culture · Collagen · Ketones · Organic acids · Stem cells · Gene expression
[Abstract]

Search results also available in MS Excel format.

Showing 1 to 20 of 62 found. Next | Sort by date