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1 Insertion sequence-driven diversification creates a globally dispersed emerging multiresistant subspecies of E. faecium
article 2007    
Author: Leavis, H.L. · Willems, R.J.L. · Wamel, W.J.B. van · Schuren, F.H. · Caspers, M.P.M. · Bonten, M.J.M.
Keywords: Biology · Biotechnology · membrane protein · article · bacterium isolate · controlled study · Enterococcus faecium · gene insertion sequence · gene sequence · gene transfer · genetic recombination · genetic variability · human · hybridization · microarray analysis · nonhuman · phylogeny · regulator gene · Animalia · Enterococcus faecium
[PDF] [Abstract]

2 Identification and characterization of the furfural and 5-(hydroxymethyl)furfural degradation pathways of Cupriavidus basilensis HMF14
article 2010    
Author: Koopman, F. · Wierckx, N. · Winde, J.H.de · Ruijssenaars, H.J.
Keywords: Biology · Degradation · Hydolysate · Hydroxymethyl furfural · Inhibitors · Lignocellulosic · 5 (hydroxymethyl)furfural · aldehyde derivative · furan derivative · furfural · lignocellulose · protein hydrolysate · unclassified drug · article · bacterial gene · bacterial strain · bacterium identification · carbon source · catabolism · controlled study · Cupriavidus · Cupriavidus basilensis · detoxification · gene sequence · microbial degradation · nonhuman · nucleotide sequence · priority journal · Pseudomonas putida · Cupriavidus · DNA Transposable Elements · Furaldehyde · Genes, Bacterial · Metabolic Networks and Pathways · Mutagenesis · Oxidoreductases · Phenotype · Pseudomonas putida
[Abstract]

3 Dynamics of the microbiota in response to host infection
article 2014    
Author: Belzer, C. · Gerber, G.K. · Roeselers, G. · Delaney, M. · DuBois, A. · Liu, Q. · Belavusava, V. · Yeliseyev, V. · Houseman, A. · Onderdonk, A. · Cavanaugh, C. · Bry, L.
Keywords: Biology · DNA 16S · Animal experiment · Animal model · Bacterial clearance · Bacterium detection · Cecum · Citrobacter rodentium · Colitis · Commensal · Descending colon · Gene sequence · Genus · Ileum · Intestine flora · Lactobacillus johnsonii · Lactobacillus reuteri · Microbial community · Microbial diversity · Nonhuman · Phylogeny · Phylum · Taxonomy · Biomedical Innovation · Healthy Living · Life · MSB - Microbiology and Systems Biology · ELSS - Earth, Life and Social Sciences
[PDF] [Abstract]

4 Mathematical design of prokaryotic clone-based microarrays
article 2005    
Author: Pieterse, B. · Quirijns, E.J. · Schuren, F.H.J. · Werf, M.J. van der
Keywords: Biology · Biotechnology · genomic DNA · Actinobacteria · article · bacterial genome · bacterial strain · DNA library · DNA microarray · Enterobacteriaceae · Firmicutes · Fusobacteria · gene expression · gene insertion · gene sequence · genetic transcription · mathematical computing · molecular cloning · nonhuman · prokaryote · Proteobacteria · species difference · statistical analysis · statistical significance · Vibrionales · Actinobacteria · Bacteria (microorganisms) · Enterobacteriaceae · Firmicutes · Fusobacteria · Prokaryota · Proteobacteria · Vibrionales
[Abstract]

5 Comparative genomics of human Lactobacillus crispatus isolates reveals genes for glycosylation and glycogen degradation: Implications for in vivo dominance of the vaginal microbiota
article 2019    
Author: Veer, C. van der · Hertzberger, R.Y. · Bruisten, S.M. · Tytgat, H.L.P. · Swanenburg, J. · Angelino-Bart, A. de Kat · Schuren, F. · Molenaar, D. · Reid, G. · Vries, H. de · Kort, R.
Keywords: Galamustine · Glycoconjugate · Glycogen · Glycosyltransferase · RNA 16S · Transposase · Amino acid sequence · Bacterial growth · Bacterial strain · Bacterium isolation · Carbohydrate metabolism · Comparative study · Enzyme activity · Female · Fermentation · Gene sequence · Genome analysis · Genomics · Genotype · Glycogen metabolism · Glycosylation · Human · In vivo study · Lactobacillus crispatus · Metagenomics · Neisseria gonorrhoeae · Nonhuman · Nucleotide sequence · Phenotype · RNA sequence · Sexually transmitted disease · Vagina flora · Whole genome sequencing · Healthy for Life · Healthy Living
[PDF] [Abstract]

6 The impact of functional genomics on microbiological food quality and safety
article 2006    
Author: Brul, S. · Schuren, F. · Montijn, R. · Keijser, B.J.F. · Spek, H. van der · Oomes, S.J.C.M.
Keywords: Biotechnology · Bacterial spore formers · Food preservation · Food processing · Genomics · Models · Resistance · amplified fragment length polymorphism · Bacillus subtilis · DNA microarray · DNA screening · food quality · food safety · functional genomics · gene sequence · heat tolerance · microbiological examination · molecular dynamics · nonhuman · quality control · sporogenesis · Bacillus subtilis · Colony Count, Microbial · Consumer Product Safety · Food Contamination · Food Microbiology · Genetic Markers · Heat · Humans · Microarray Analysis · Polymorphism, Restriction Fragment Length · Spores, Bacterial · Bacillus subtilis · Bacteria (microorganisms)
[Abstract]

7 Phylogenetic and biochemical characterization of a novel cluster of intracellular fungal α-amylase enzymes
article 2007    
Author: Kaaij, R.M. van der · Janeček, Š. · Maarel, M.J.E.C. van der · Dijkhuizen, L.
Keywords: Nutrition · Food technology · amylase · amylase 1p · amylase D · glucan · maltotriose · starch · article · Ascomycetes · Aspergillus niger · Basidiomycetes · enzyme activity · enzyme analysis · gene cluster · gene overexpression · gene sequence · Histoplasma capsulatum · nonhuman · nucleotide sequence · phylogeny · priority journal · protein purification · sequence homology · alpha-Amylase · Amino Acid Sequence · Animals · Aspergillus niger · Cell Wall · Fungal Proteins · Fungi · Glucans · Histoplasma · Molecular Sequence Data · Phylogeny · Sequence Alignment · Starch · Substrate Specificity · Ajellomyces capsulatus · Ascomycota · Aspergillus niger · Basidiomycota · Fungi
[Abstract]

8 Unravelling the multiple effects of lactic acid stress on Lactobacillus plantarum by transcription profiling
article 2005    
Author: Pieterse, B. · Leer, R.J. · Schuren, F.H.J. · Werf, M.J. van der
Keywords: Biology · Biotechnology · lactic acid · article · bacterial genome · bacterial growth · concentration (parameters) · controlled study · culture medium · DNA microarray · gene expression profiling · gene identification · gene sequence · genetic code · genetic transcription · growth rate · lactic acid bacterium · Lactobacillus plantarum · nonhuman · nucleotide sequence · open reading frame · osmolarity · priority journal · RNA isolation · steady state · Bioreactors · Fermentation · Gene Expression Profiling · Gene Expression Regulation, Bacterial · Genes, Bacterial · Hydrogen-Ion Concentration · Lactic Acid · Lactobacillus plantarum · Transcription, Genetic · Bacteria (microorganisms) · Lactobacillus plantarum
[Abstract]

9 Rapid and reliable discrimination between Shigella species and Escherichia coli using MALDI-TOF mass spectrometry
article 2015    
Author: Paauw, A. · Jonker, D. · Roeselers, G. · Heng, J.M.E. · Mars-Groenendijk, R.H. · Trip, H. · Molhoek, E.M. · Jansen, H.J. · Plas, J. van der · Jong, A.L. de · Majchrzykiewicz-Koehorst, J.A. · Speksnijder, A.G.C.L.
Keywords: Biology · Bruker · Discrimination · Escherichia coli · MALDI-TOF · Mass spectrometry · Shigella species · Allele · Bacterial strain · Bacterium identification · Bacterium isolate · Computer program · Controlled study · Escherichia coli · Gene sequence · Genetic variability · Human · Matrix assisted laser desorption ionization time of flight mass spectrometry · Multilocus sequence typing · Nonhuman · Nuclear magnetic resonance spectrometer · Serotyping · Shigella · Shigella boydii · Shigella dysenteriae · Shigella flexneri · Shigella sonnei · Species distribution · Observation, Weapon & Protection Systems · CBRN - CBRN Protection · TS - Technical Sciences
[Abstract]

10 Cloning and characterization of the NADPH cytochrome P450 oxidoreductase gene from the filamentous fungus Aspergillus niger
article 1995    
Author: Brink, J.M. van den · Zeijl, C.M.J. van · Brons, J.F. · Hondel, C.A.M.J.J. van den · Gorcom, R.F.M. van
Keywords: Nutrition · Benzoic acid derivative · Reduced nicotinamide adenine dinucleotide phosphate ferrihemoprotein reductase · Amino acid sequence · Aspergillus niger · Gene isolation · Gene sequence · Genetic analysis · Hybridization · Molecular cloning · Nonhuman · Nucleotide sequence · Polymerase chain reaction · Priority journal · Sequence analysis · Structure activity relation · Amidohydrolases · Amino Acid Sequence · Aspergillus niger · Base Sequence · Benzoates · Benzoic Acid · Cloning, Molecular · Conserved Sequence · Enzyme Induction · Gene Dosage · Gene Expression Regulation, Fungal · Genes, Structural, Fungal · Molecular Sequence Data · NADPH-Ferrihemoprotein Reductase · Polymerase Chain Reaction · Restriction Mapping · Sequence Alignment · Sequence Analysis, DNA · Transformation, Genetic
[Abstract]

11 Characterization of the Aspergillus niger prtT, a unique regulator of extracellular protease encoding genes
article 2008    
Author: Punt, P.J. · Schuren, F.H.J. · Lehmbeck, J. · Christensen, T. · Hjort, C. · Hondel, C.A.M.J.J. van den
Keywords: Biology · AmdS selection · Aspergillus · Complementation · Cosmid library · Gene cloning · Protease mutants · Regulation · Self replicating vector · Upstream open reading frames · Zn2Cys6 finger protein · alkaline proteinase · amylase · article · Aspergillus niger · cosmid · fungal gene · gene cluster · gene control · gene expression · gene isolation · gene library · gene mutation · gene sequence · genetic analysis · genetic code · genetic selection · genetic trait · molecular cloning · mutational analysis · nonhuman · nucleotide sequence · priority journal · prtT gene · regulator gene · RNA splicing · Aspergillus niger · Aspergillus oryzae · Blotting, Northern · Cloning, Molecular · Cosmids · Fungal Proteins · Gene Deletion · Gene Expression Profiling · Gene Library · Genetic Complementation Test · Multigene Family · Peptide Hydrolases · Sequence Homology, Amino Acid · Synteny · Transcription Factors · Aspergillus · Aspergillus niger · Aspergillus oryzae · Emericella nidulans
[Abstract]

12 Characterisation of botulinum toxins type C, D, E, and F by matrix-assisted laser desorption ionisation and electrospray mass spectrometry
article 2004    
Author: Baar, B.L.M. van · Hulst, A.G. · Jong, A.L. de · Wils, E.R.J.
Keywords: Amino acid sequencing · Botulinum toxins · Mass spectrometry · Peptide mapping · Toxins · Genes · Ionization · Laser applications · Liquid chromatography · Mass spectrometry · Proteins · Botulinum toxins · Gene sequences · Bacteria · Botulinum toxin · Botulinum toxin c · Botulinum toxin d · Botulinum toxin E · Botulinum toxin f · Hemagglutinin · Neurotoxin · Trypsin · Unclassified drug · Amino acid sequence · Analytic method · Article · Clostridium botulinum · Controlled study · Electrospray mass spectrometry · Gene sequence · Hemagglutination · Herring · Liquid chromatography · Matrix assisted laser desorption ionization time of flight mass spectrometry · Nonhuman · Priority journal · Tandem mass spectrometry · Amino Acid Sequence · Botulinum Toxins · Molecular Sequence Data · Peptide Mapping · Spectrometry, Mass, Electrospray Ionization · Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization · Bacteria (microorganisms) · Clostridium · Clostridium botulinum · Clupea harengus · Clupeidae
[Abstract]

13 K-ras oncogene mutations in sporadic colorectal cancer in The Netherlands Cohort Study
article 2003    
Author: Brink, M. · Goeij, A.F.P.M. de · Weijenberg, M.P. · Roemen, G.M.J.M. · Lentjes, M.H.F.M. · Pachen, M.M.M. · Smits, K.M. · Bruïne, A.P. de · Goldbohm, R.A. · Brandt, P.A. van den
Keywords: Health Biology · Food and Chemical Risk Analysis · adenine · DNA fragment · guanine · thymine · adult · aged · cancer cell culture · cancer growth · cancer localization · cancer risk · cancer staging · cancer tissue · codon · cohort analysis · colon carcinogenesis · colorectal cancer · controlled study · correlation analysis · DNA purification · environmental factor · exon · familial cancer · family history · female · gene mutation · gene sequence · histopathology · human · human cell · human tissue · incidence · major clinical study · male · mutational analysis · Netherlands · nucleic acid base substitution · oncogene K ras · polymerase chain reaction · priority journal · reproducibility · review · tumor biopsy · tumor differentiation · validation process · Base Sequence · Cohort Studies · Colorectal Neoplasms · DNA Primers · Genes, ras · Humans · Mutation · Netherlands
[Abstract]

14 Characterisation of botulinum toxins type A and B, by matrix-assisted laser desorption ionisation and electrospray mass spectrometry
article 2002    
Author: Baar, B.L.M. van · Hulst, A.G. · Jong, A.L. de · Wils, E.R.J.
Keywords: Amino acid sequencing · Botulinum toxins · Mass spectrometry · Peptide mapping · Toxins · Amino acids · Bacteria · Desorption · Ionization · Laser applications · Mass spectrometry · Military operations · Proteins · Electrospray · Toxic materials · Botulinum toxin A · Botulinum toxin B · Hemagglutinin · Pepsin A · Trypsin · Amino acid sequence · Analytic method · Article · Bacterial strain · Clostridium botulinum · Data base · Gene sequence · Liquid chromatography · Mass spectrometry · Priority journal · Protein analysis · Sequence alignment · Amino Acid Sequence · Botulinum Toxin Type A · Botulinum Toxins · Molecular Sequence Data · Pepsin A · Sequence Homology, Amino Acid · Spectrometry, Mass, Electrospray Ionization · Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization · Trypsin · Abelmoschus · Bacteria (microorganisms) · Clostridium · Clostridium botulinum
[Abstract]

15 The characterisation of Bacillus spores occurring in the manufacturing of (low acid) canned products
article 2007    
Author: Oomes, S.J.C.M. · Zuijlen, A.C.M. van · Hehenkamp, J.O. · Witsenboer, H. · Vossen, J.M.B.M. van der · Brul, S.
Keywords: Biology · Biotechnology · Cluster analysis · Food processing · Molecular phylogenetic characterisation · Spore heat resistance · acid · metal ion · RNA 16S · acidity · article · Bacillus subtilis · bacterial spore · bacterium contamination · canned food · DNA DNA hybridization · fatty acid analysis · food contamination · food industry · food preservation · food processing · gene sequence · Geobacillus stearothermophilus · heat tolerance · molecular typing · nonhuman · phylogeny · ribotyping · RNA gene · sporogenesis · strain identification · survival · validation process · Bacillus · Bacterial Typing Techniques · Cluster Analysis · Colony Count, Microbial · Consumer Product Safety · Fatty Acids · Food Contamination · Food Handling · Food Microbiology · Food Preservation · Germination · Heat · Humans · Phylogeny · RNA, Ribosomal, 16S · Species Specificity · Spores, Bacterial · Bacillus (bacterium) · Bacteria (microorganisms)
[Abstract]

16 Glucan synthesis in the genus Lactobacillus: Isolation and characterization of glucansucrase genes, enzymes and glucan products from six different strains
article 2004    
Author: Kralj, S. · Geel-Schutten, G.H. van · Dondorff, M.M.G. · Kirsanovs, S. · Maarel, M.J.E.C. van der · Dijkhuizen, L.
Keywords: Nutrition · Food technology · Amino acid · Bacterial enzyme · Dextransucrase · Glucan · Glucosyltransferase · Sucrase · Amino terminal sequence · Bacterial strain · Binding site · Carbohydrate synthesis · Controlled study · Enzyme analysis · Enzyme isolation · Gene isolation · Gene sequence · Genetic analysis · Lactobacillus · Lactobacillus fermentum · Lactobacillus reuteri · Lactobacillus sakei · Nonhuman · Nucleotide sequence · Priority journal · Protein structure · Amino Acid Motifs · Bacterial Proteins · Binding Sites · Catalytic Domain · Cloning, Molecular · DNA, Bacterial · Escherichia coli · Genes, Bacterial · Glucans · Glucosyltransferases · Glycosyltransferases · Lactobacillus · Molecular Sequence Data · Phylogeny · Protein Sorting Signals · Protein Structure, Tertiary · Recombinant Proteins · Repetitive Sequences, Amino Acid · Sequence Analysis, DNA · Sequence Homology, Amino Acid · Sucrase · Lactobacillus · Lactobacillus fermentum · Lactobacillus parabuchneri · Lactobacillus reuteri · Lactobacillus sakei · Leuconostoc · Streptococcus
[Abstract]

17 Molecular changes in the degenerated goat intervertebral disc
article 2008    
Author: Hoogendoorn, R. · Doulabi, B.Z. · Huang, C.L. · Wuisman, P.I. · Bank, R.A. · Helder, M.N.
Keywords: Biomedical Research · Animal model · Biochemical composition · Disc degeneration · Gene expression · aggrecan · chondroitin ABC lyase · collagen · collagen type 1 · collagen type 2 · collagenase 3 · glycosaminoglycan · hydroxyproline · metalloproteinase · pyridinoline · thrombospondin · scleroprotein · animal experiment · animal model · article · cross linking · disease severity · female · gene expression · gene sequence · goat · intervertebral disk · intervertebral disk degeneration · nonhuman · priority journal · protein motif · animal · comparative study · disease model · gene expression profiling · genetics · lumbar vertebra · metabolism · methodology · pathology · physiology · spine disease · Animals · Collagen · Disease Models, Animal · Extracellular Matrix Proteins · Female · Gene Expression Profiling · Goats · Intervertebral Disk · Lumbar Vertebrae · Spinal Diseases
[Abstract]

18 Expression of the xylulose 5-phosphate phosphoketolase gene, xpkA, from Lactobacillus pentosus MD363 is induced by sugars that are fermented via the phosphoketolase pathway and is repressed by glucose mediated by CcpA and the mannose phosphoenolpyruvate phosphotransferase system
article 2002    
Author: Posthuma, C.C. · Bader, R. · Engelmann, R. · Postma, P.W. · Hengstenberg, W. · Pouwels, P.H.
Keywords: Environment · Amino acids · Aldehyde-Lyases · Amino Acid Sequence · Bacterial Proteins · Bacteria (microorganisms) · Bifidobacterium · Bifidobacterium animalis · Cloning · Enzymes · Escherichia coli · Glucose · Catabolites · Genes · Gene Deletion · Gene Expression Regulation, Bacterial · Gene expression · Gene induction · Gene repression · Gene sequence · Lactobacillus · Lactobacillus pentosus · Mannose · Molecular Sequence Data · Posibacteria · Prokaryota · Pentosephosphates · Phosphoenolpyruvate Sugar Phosphotransferase System · Repressor Proteins · Sequence Alignment · Sequence Analysis, DNA · Bacterial enzyme · Carbon catabolite protein a · Mannose phosphoenolpyruvate phosphotransferase · Unclassified drug · Xylulose 5 phosphate phosphoketolase · Bacterium · Bacterial gene · Bacterium mutant · Enzyme activity · Enzyme purification · Fermentation · Molecular cloning · Nonhuman · Nucleotide sequence · Xpka gene · DNA-Binding Proteins
[PDF] [Abstract]

19 Replication-deficient human adenovirus type 35 vectors for gene transfer and vaccination: Efficient human cell infection and bypass of preexisting adenovirus immunity
article 2003    
Author: Vogels, R. · Zuijdgeest, D. · Rijnsoever, R. van · Hartkoorn, E. · Damen, I. · Béthune, M.-P. de · Kostense, S. · Penders, G. · Helmus, N. · Koudstaal, W. · Cecchini, M. · Wetterwald, A. · Sprangers, M. · Lemckert, A. · Ophorst, O. · Koel, B. · Meerendonk, M. van · Quax, P. · Panitti, L. · Grimbergen, J. · Bout, A. · Goudsmit, J. · Havenga, M.
Keywords: Biology · Biomedical Research · Adenovirus vector · Animal cell · Controlled study · Dendritic cell · Gene insertion · Gene sequence · Gene therapy · Gene transfer · Genetic complementation · Genetic transduction · Human · Human adenovirus · Human adenovirus 35 · Human adenovirus 5 · Human cell · Immune response · Mouse · Nonhuman · Plasmid · Prevalence · Smooth muscle fiber · Synoviocyte · Vaccination · Virus immunity · Virus replication · Adenovirus E1B Proteins · Adenoviruses, Human · Animals · Antibodies, Viral · Cell Line · Cells, Cultured · Dendritic Cells · Gene Transfer Techniques · Genetic Vectors · Humans · Mice · Mice, Inbred BALB C · Muscle, Smooth · Neutralization Tests · Plasmids · Synovial Membrane · Vaccination · Virus Assembly · Virus Replication
[Abstract]

20 Database mining and transcriptional analysis of genes encoding inulin-modifying enzymes of Aspergillus niger
article 2006    
Author: Yuan, X.L. · Goosen, C. · Kools, H. · Maarel, M.J.E.C. van der · Hondel, C.A.M.J.J. van den · Dijkhuizen, L. · Ram, A.F.J.
Keywords: Food technology · cell enzyme · fungal enzyme · glycosidase · inulin · inulin modifying enzyme · sucrose · unclassified drug · article · Aspergillus niger · catabolite repression · controlled study · culture medium · enzyme activity · fungal metabolism · fungal strain · fungus culture · fungus growth · gene sequence · genetic code · genetic transcription · genome · genome analysis · information processing · nonhuman · nucleotide sequence · priority journal · protein analysis · protein expression · sequence analysis · transcription regulation · upregulation · Aspergillus niger · beta-Fructofuranosidase · Blotting, Northern · Computational Biology · DNA, Fungal · Fructose · Gene Expression Regulation, Fungal · Genome, Fungal · Inulin · Molecular Sequence Data · Phylogeny · Protein Sorting Signals · RNA, Fungal · RNA, Messenger · Sequence Homology, Amino Acid · Sucrose · Transcription, Genetic · Aspergillus niger · Fungi
[Abstract]

Search results also available in MS Excel format.

Showing 1 to 20 of 25 found. Next | Sort by date