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1 Genomic diversity within the enterobacter cloacae complex
article 2008    
Author: Paauw, A. · Caspers, M.P.M. · Schuren, F.H.J. · Leverstein-van Hall, M.A. · Delétoile, A. · Montijn, R.C. · Verhoef, J. · Fluit, A.C.
Keywords: Biology · Cladistics · comparative genomic hybridization · Enterobacter hormaechei · microarray analysis · molecular evolution · multilocus sequence typing · species comparison · species identification · bacterial genome · DNA sequence · nucleic acid hybridization · phylogeny · Enterobacter · Enterobacter cloacae · Genetic Variation · Genome, Bacterial · Genotype · Nucleic Acid Hybridization · Phylogeny · Sequence Analysis, DNA · Food and Nutrition · Healthy Living
[PDF] [Abstract]

2 Genome-wide DNA microarray analysis of Francisella tularensis strains demonstrates extensive genetic conservation within the species but identifies regions that are unique to the highly virulent F. tularensis subsp. tularensis
article 2003    
Author: Broekhuijsen, M.P. · Larsson, P. · Johansson, A. · Byström, M. · Eriksson, U. · Larsson, E. · Prior, R.G. · Sjöstedt, A. · Titball, R.W. · Forsman, M.
Keywords: Biology · Bacterial DNA · Bacterial genetics · Bacterial strain · Bacterial virulence · Cluster analysis · Controlled study · DNA determination · DNA library · DNA microarray · DNA sequence · Francisella tularensis · Genetic conservation · Genome analysis · Geography · Hybridization · Japan · Molecular cloning · Nonhuman · Nucleotide sequence · Open reading frame · Polymerase chain reaction · Priority journal · Tularemia · Bacterial Proteins · Base Sequence · Cluster Analysis · Conserved Sequence · Francisella tularensis · Gene Expression Profiling · Genome, Bacterial · Humans · Molecular Sequence Data · Oligonucleotide Array Sequence Analysis · Sequence Analysis, DNA · Virulence · Bacteria (microorganisms) · Francisella · Francisella tularensis · Francisella tularensis subsp. holarctica · Francisella tularensis subsp. mediasiatica · Francisella tularensis subsp. novicida · Francisella tularensis subsp. tularensis · Negibacteria · Bacterial Proteins
[PDF] [Abstract]

3 A Bifidobacterium mixed-species microarray for high resolution discrimination between intestinal bifidobacteria
article 2009    
Author: Boesten, R.J. · Schuren, F.H.J. · Vos, W.M.de
Keywords: Biology · Biotechnology · Bifidobacterium · DNA-DNA hybridization · Genomic comparison · Microarray · bacterial DNA · RNA 16S · article · bacterial genome · bacterium identification · Bifidobacterium · Bifidobacterium adolescentis · Bifidobacterium animalis · Bifidobacterium bifidum · Bifidobacterium catenulatum · Bifidobacterium longum · Bifidobacterium pseudolongum · DNA DNA hybridization · DNA microarray · intestine flora · nonhuman · nucleotide sequence · priority journal · species identification · unindexed sequence · Animals · Bacterial Typing Techniques · Bifidobacterium · Cluster Analysis · Comparative Genomic Hybridization · DNA, Bacterial · Genome, Bacterial · Genomic Library · Intestines · Oligonucleotide Array Sequence Analysis · Phylogeny · RNA, Ribosomal, 16S · Species Specificity · Bifidobacterium · Bifidobacterium adolescentis · Bifidobacterium animalis · Bifidobacterium animalis subsp. animalis · Bifidobacterium animalis subsp. lactis · Bifidobacterium bifidum · Bifidobacterium catenulatum · Bifidobacterium longum · Bifidobacterium pseudolongum · Mammalia
[Abstract]

4 Genomotyping of Pseudomonas putida strains using P. putida KT2440-based high-density DNA microarrays: Implications for transcriptomics studies
article 2007    
Author: Ballerstedt, H. · Volkers, R.J.M. · Mars, A.E. · Hallsworth, J.E. · Santos, V.A.M.D. · Puchalka, J. · Duuren, J. van · Eggink, G. · Timmis, K.N. · Bont, J.A.M. de · Wery, J.
Keywords: Biology · Biotechnology · Genomotyping · Pseudomonas putida · Solvent-tolerant bacteria · Transcriptomics · Bacteria · Genes · Microarrays · Oligonucleotides · Proteins · Solvents · Genomotyping · Microarray hybridizations · Pseudomonas putida · Solvent tolerant bacteria · Transcriptomics · DNA · bacterial DNA · bacterial protein · genomic DNA · array · bacterium · catabolism · DNA fingerprinting · gene · hybridization · metabolism · phylogeny · protein · article · bacterial genome · bacterial strain · bacterium culture · cell function · comparative study · controlled study · DNA hybridization · DNA microarray · genetic strain · genome analysis · genotype · microarray analysis · molecular phylogeny · nonhuman · protein degradation · protein metabolism · proteomics · Pseudomonas · pseudomonas monteilii · Pseudomonas putida · reliability · transcriptomics · Genome, Bacterial · Genomics · Oligonucleotide Array Sequence Analysis · Phylogeny · Pseudomonas putida · RNA · Pseudomonas · Pseudomonas monteilii · Pseudomonas putida
[Abstract]

5 Determination of the relationship between group A streptococcal genome content, M type, and toxic shock syndrome by a mixed genome microarray
article 2007    
Author: Vlaminckx, B.J.M. · Schuren, F.H.J. · Montijn, R.C. · Caspers, M.P.M. · Fluit, A.C. · Wannet, W.J.B. · Schouls, L.M. · Verhoef, J. · Jansen, W.T.M.
Keywords: Biology · Biotechnology · citric acid · collagen binding factor · complement inhibiting protein · exotoxin · ferric ion · fibrinogen binding factor · iron binding protein · lyase · speA protein · virulence factor · article · bacterial strain · bacterial virulence · bacteriophage · controlled study · DNA fingerprinting · DNA microarray · gene identification · genetic association · genetic code · genetic variability · genome · genomics · human · hypoxia · major clinical study · microbial diversity · Netherlands · nucleotide sequence · priority journal · Streptococcus group A · toxic shock syndrome · Antigens, Bacterial · Bacterial Outer Membrane Proteins · Bacterial Proteins · Carrier Proteins · Electrophoresis, Gel, Pulsed-Field · Gene Expression Profiling · Genome, Bacterial · Humans · Image Processing, Computer-Assisted · Oligonucleotide Array Sequence Analysis · Shock, Septic · Streptococcal Infections · Streptococcus pyogenes · Virulence Factors
[Abstract]

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