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Hemel, M. (author), Peters, D.J. (author), Schweckendiek, T. (author), Jonkman, Sebastiaan N. (author)The historic canal walls of Amsterdam, stretching 200 km in total, are constructed as a masonry wall on a timber deck supported by vertical timber piles. Understanding the resistance against lateral failure of these quays has been challenging due to uncertainties in their working principles, geometry, soil and structural properties. This...journal article 2024
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Peters, L. (author), Bajcsy, Andrea (author), Chiu, Chih Yuan (author), Fridovich-Keil, David (author), Laine, Forrest (author), Ferranti, L. (author), Alonso-Mora, J. (author)Contingency planning, wherein an agent generates a set of possible plans conditioned on the outcome of an uncertain event, is an increasingly popular way for robots to act under uncertainty. In this work we take a game-theoretic perspective on contingency planning, tailored to multi-agent scenarios in which a robot's actions impact the...journal article 2024
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Boon, M.M. (author), Buntic, I. (author), Ahmed, K. (author), Dopffel, Nicole (author), Peters, C.A. (author), Hajibeygi, H. (author)Characterization of the microbial activity impacts on transport and storage of hydrogen is a crucial aspect of successful Underground Hydrogen Storage (UHS). Microbes can use hydrogen for their metabolism, which can then lead to formation of biofilms. Biofilms can potentially alter the wettability of the system and, consequently, impact the...journal article 2024
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van der Vegt, N. (author), Klerk, W.J. (author), Peters, D.J. (author), van Gent, M.R.A. (author), Hofland, Bas (author)Initial damage, caused by previous wave loading or other events, might affect the hydraulic stability of pattern-placed revetments. Three common types of damage are considered in this study. The effect of this assumed initial damage on the hydraulic stability and failure probability of revetments is quantified using a FEM model. This model is...journal article 2024
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Gil Jimenez, A. (author), van Dijk, Nick (author), Vos, Joris L. (author), Lubeck, Yoni (author), van Montfoort, Maurits L. (author), Peters, Dennis (author), Hooijberg, Erik (author), Broeks, Annegien (author), Wessels, L.F.A. (author)Immune checkpoint inhibitors (ICI) can achieve remarkable responses in urothelial cancer (UC), which may depend on tumor microenvironment (TME) characteristics. However, the relationship between the TME, usually characterized by immune cell density, and response to ICI is unclear. Here, we quantify the TME immune cell densities and spatial...journal article 2024
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Barth, R. (author), Pradhan, B. (author), Kim, E. (author), Davidson, Iain F. (author), van der Torre, J. (author), Peters, Jan‑Michael ‑M (author), Dekker, C. (author)Correction to: Scientific Reports, published online 19 May 2023 The original version of this Article contained an error in Figure 1b-1, where the fore- and background order of the strands “DNA” (in black) and “Brn1 Kleisin” (in green), were switched. The original Figure 1 and accompanying legend appear below. (Figure presented.) Description...journal article 2023
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Peters, R.Y. (author), Dukai, B. (author), Gao, W. (author), Stoter, J.E. (author)De 3D BAG bevat automatisch gereconstrueerde LoD2-modellen van alle panden in Nederland, en is voor het eerst gereconstrueerd in het voorjaar van 2021 op basis van AHN3.1 Op basis van AHN4 is een nieuwe versie van de 3D BAG gereconstrueerd, in een samenwerking tussen 3DGI en de onderzoeksgroep 3D Geoinformation (TU Delft). AHN4 is niet alleen...journal article 2023
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Davidson, Iain F. (author), Barth, R. (author), Zaczek, Maciej (author), van der Torre, J. (author), Tang, Wen (author), Nagasaka, Kota (author), Janissen, R. (author), Kerssemakers, J.W.J. (author), Wutz, Gordana (author), Dekker, C. (author), Peters, Jan Michael (author)In eukaryotes, genomic DNA is extruded into loops by cohesin<sup>1</sup>. By restraining this process, the DNA-binding protein CCCTC-binding factor (CTCF) generates topologically associating domains (TADs)<sup>2,3</sup> that have important roles in gene regulation and recombination during development and disease<sup>1,4–7</sup>. How CTCF...journal article 2023
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Zou, P. (author), Ruiter, N. (author), Uijttewaal, W.S.J. (author), Chen, X. (author), Peters, D.J. (author), Bricker, J.D. (author)Marine biofouling is a major concern in the operational performance of submerged floating tunnels (SFTs). The objective of this research is to investigate the effects of marine fouling (represented by surface roughness) on the hydrodynamic behavior of SFTs, including the hydrodynamic forces on the SFT subject to current-only, wave-only, and...journal article 2023
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Liu, Xinjie (author), Peters, L. (author), Alonso-Mora, J. (author)Many autonomous agents, such as intelligent vehicles, are inherently required to interact with one another. Game theory provides a natural mathematical tool for robot motion planning in such interactive settings. However, tractable algorithms for such problems usually rely on a strong assumption, namely that the objectives of all players in...journal article 2023
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Yang, Z. (author), Ye, Qin (author), Wang, Xufei (author), Peters, R.Y. (author)Objective Recent advancements in laser scanners and photogrammetry technology have significantly reduced the cost of acquiring 3D point clouds. Consequently, various types of point clouds have gradually become popular data sources for urban applications. The accurate registration of cross-source and multi<sup>-</sup>temporal point clouds must...journal article 2023
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Peters, L. (author), Rubies-Royo, Vicenç (author), Tomlin, Claire J. (author), Ferranti, L. (author), Alonso-Mora, J. (author), Stachniss, Cyrill (author), Fridovich-Keil, David (author)Robots deployed to the real world must be able to interact with other agents in their environment. Dynamic game theory provides a powerful mathematical framework for modeling scenarios in which agents have individual objectives and interactions evolve over time. However, a key limitation of such techniques is that they require a priori...journal article 2023
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Novella-Rausell, Claudio (author), Grudniewska, Magda (author), Peters, Dorien J.M. (author), Mahfouz, A.M.E.T.A. (author)The kidney's cellular diversity is on par with its physiological intricacy; yet identifying cell populations and their markers remains challenging. Here, we created a comprehensive atlas of the healthy adult mouse kidney (MKA: Mouse Kidney Atlas) by integrating 140.000 cells and nuclei from 59 publicly available single-cell and single-nuclei...journal article 2023
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Li, Jingqi (author), Chiu, Chih Yuan (author), Peters, L. (author), Sojoudi, Somayeh (author), Tomlin, Claire (author), Fridovich-Keil, David (author)In multi-agent dynamic games, the Nash equilibrium state trajectory of each agent is determined by its cost function and the information pattern of the game. However, the cost and trajectory of each agent may be unavailable to the other agents. Prior work on using partial observations to infer the costs in dynamic games assumes an open-loop...journal article 2023
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Jung, Jiwon (author), Kim, K. (author), Peters, T. (author), Snelders, H.M.J.J. (author), Kleinsmann, M.S. (author)Designers are increasingly collaborating with data scientists to apply smart data technologies to understand large-scale user behavior during their design research. This is useful in specific impact domains with vulnerable users and unfamiliar contexts, such as healthcare design. Patient journey mapping is the most common design tool for...journal article 2023
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Lefrère, Hanne (author), Moore, Kat (author), Floris, Giuseppe (author), Sanders, Joyce (author), Seignette, Iris M. (author), Bismeijer, Tycho (author), Peters, Dennis (author), Broeks, Annegien (author), Wessels, L.F.A. (author)PURPOSE: Patients with postpartum breast cancer diagnosed after cessation of breastfeeding (postweaning, PP-BCPW) have a particularly poor prognosis compared with patients diagnosed during lactation (PP-BCDL), or to pregnant (Pr-BC) and nulliparous (NP-BC) patients, regardless of standard prognostic characteristics. Animal studies point to a...journal article 2023
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Peters, Luka (author), Serhat, Gokhan (author), Vardar, Y. (author)Thermal feedback has been proven to enhance user experience in human-machine interactions. Yet state-of-the-art thermal technology has focused on the single finger or palm in static contact, overlooking dynamic and multi-finger interactions. The underlying challenges include incompatible designs of conventional interfaces for providing...journal article 2023
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Barth, R. (author), Pradhan, B. (author), Kim, E. (author), Davidson, Iain F. (author), van der Torre, J. (author), Peters, Jan Michael (author), Dekker, C. (author)DNA loop extrusion by structural-maintenance-of-chromosome (SMC) complexes has emerged as a primary organizing principle for chromosomes. The mechanism by which SMC motor proteins extrude DNA loops is still unresolved and much debated. The ring-like structure of SMC complexes prompted multiple models where the extruded DNA is topologically or...journal article 2023
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Dekker, C. (author), Haering, Christian H. (author), Peters, Jan Michael (author), Rowland, B.D. (author)A potential mechanism of DNA loop extrusion by molecular motors is discussed.journal article 2023
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Korff, M. (author), Hemel, M. (author), Peters, D.J. (author)A quay wall directly next to a building, both dating from around 1870, collapsed along the Grimburgwal in Amsterdam, the Netherlands, on 1 September 2020. The historic quay wall consisted of a masonry wall, built of a timber deck supported by several rows of timber piles of about 12 m long. As over 200 km of such quays exists in Amsterdam and...journal article 2022