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Mingchen Yao

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10 records found

Journal article (2025) - Mengqing Fan, Ziqian Wang, Mingchen Yao, Xiaoming Li, Walter van der Meer, Yu Tao, Joan B. Rose, Gang Liu
Plastic pipes are increasingly used in drinking water distribution systems, yet their impact on water quality remains insufficiently understood. Here, we systematically investigate the dual outcomes posed by plastic pipes─chemical leaching and cascaded microbial exposure risks─by integrating Fourier Transform Ion Cyclotron Resonance Mass Spectrometry and metagenomic analysis. Our results reveal that plastic pipes continuously release dissolved organic matter (DOM), including organic additives such as bisphenols (BPs) and organophosphate esters (OPEs), which profoundly reshape microbial communities. Under chlorinated conditions, leached DOM alters microbial diversity, promoting chlorine-resistant bacteria and opportunistic pathogens (OPs), while under nonchlorinated conditions, it accelerates microbial growth and enriches antibiotic resistance genes (ARGs), OPs, and virulence factors (VFs). Among plastic materials, polyethylene (PE) exhibited the highest chemical risk, releasing high concentrations of TCPP (700 ng/L) and BPF (200 ng/L) along with 207–227 unique DOM molecules. In contrast, polyvinyl chloride (PVC) supported the highest OP abundance, while polypropylene random copolymer (PPR) fostered the greatest OP diversity. These findings challenge conventional drinking water safety assessments that separate chemical contamination from microbial risk, underscoring the urgent need for an integrated risk assessment framework. Furthermore, they highlight the necessity of paying greater attention to the chemical and cascading microbial issues arising from the leaching of plastic pipes into drinking water, and of conducting a more comprehensive assessment of the associated potential health risks. ...
Journal article (2025) - Xiangyu Yang, Mingchen Yao, Peng Li, Jan Peter van der Hoek, Lujing Zhang, Gang Liu
Mutual symbiosis of electroactive bacteria (EAB) and denitrifier may be the key for solving the refractory carbon and residual nitrogen in wastewater treatment plant effluent. However, its application is hampered by unclear co-metabolic model and uncertain electron transfer. Here, we achieved 3–5 times increase in refractory carbon degradation, 40 % improvement in denitrification, and 36.0 % decrease in N2O emission by co-culturing P. aeruginosa strain GWP-1 and G. sulfurreducens. Such an enhancement is obtained by both refractory carbon co-metabolism and interspecies electron transfer (IET) between GWP-1 and G. sulfurreducens. Importantly, IET was quantified via isotopic approach, which revealed that G. sulfureducens supplies more electrons to GWP-1 when the system was fed with cellulose (0.071 mM) than glucose (0.012 mM). This study demonstrates that the residual refractory carbon and nitrogen in treated wastewater could be further converted by mutual symbiosis of EAB and denitrifiers, which paves a synergic way for pollution and carbon reduction. ...
Journal article (2025) - Anran Ren, Mingchen Yao, Yue Zhang, Lihua Chen, Xiaoming Li, Wei Yan, Walter van der Meer, Joan Rose, Gang Liu
Shower systems create conditions conducive to the growth of opportunistic pathogens, but the timing and location of associated risks are poorly understood. In this study, we constructed 48 full size shower units with six incubation periods (4, 10, 16, 22, 30, and 40 weeks) and four water heater temperature (39, 45, 51, and 58 °C) to examine the dynamics of microbial growth and pathogen distribution. Results showed that during the initial stage (4 weeks), peak biomass was observed for all biofilms, ranked as shower hose (SHE) > cold-water pipe (CWP) > hot-water pipe (HWP), followed by a sharp decline by the 10th-week. At the 4th-week, the biofilm was loose and easily detached into the water, possibly promoted by leached organic carbon from plastic material, fostering the growth of specific microorganisms. The impacts of stagnation and temperature became more pronounced in CWP and HWP over time. Legionella pneumophila appeared in biofilms at the 4th-week, disappeared, and reappeared in large numbers since the 22nd-week. Differently, Mycobacterium spp. emerged in large numbers after 30 weeks. Both pathogens were notably enriched in showerheads and shower hoses. This study highlights critical periods of higher risk in shower systems, particularly in the early stages (4 weeks) and after 22 weeks, suggesting that risks can be mitigated by pre-soaking pipes or regularly cleaning (e.g., heat shock flushing) and replacing showerheads and hoses. ...
Journal article (2025) - Yue Zhang, Xiao-Ming Li, Mingchen Yao, Walter G.J. van der Meer, Gang Liu
Extreme rainfall and urban flooding pose escalating risks to public health by mobilizing sewage and pathogenic microorganisms. In July 2021, record-breaking rainfall in Henan Province, China, caused catastrophic flooding, yet the microbial health risks associated with such events remain poorly quantified. Here, we applied high-throughput qPCR arrays to detect 21 pathogenic bacteria in floodwater and postflood tap water, and used quantitative microbial risk assessment (QMRA) to estimate infection probabilities for exposed residents. Our results showed that in floodwater, 21 pathogenic bacteria were detected, with Cryptosporidium spp. (579.8 gc/L) and Pseudomonas aeruginosa (13,500.9 gc/L), being prominent, which were also identified in tap water. Floodwater exposure substantially increases infection risks, highlighting ingestion and inhalation as primary pathways. Simple protective measures, such as avoiding contact with contaminated water, can significantly reduce risks. This study provides the first integrated molecular and risk-based assessment of microbial hazards during an extreme flood event. The findings underscore the importance of water quality monitoring, improved sewage and drainage management, and timely public health interventions such as boil water advisories. As climate change intensifies the frequency of extreme rainfall events, proactive surveillance and international collaboration will be essential to prevent waterborne disease outbreaks and protect vulnerable populations. ...
Journal article (2025) - Xiangyu Yang, Mingchen Yao, Peng Li, Jan Peter van der Hoek, Lujing Zhang, Gang Liu
Background: Denitrification in wastewater treatment is severely limited under low-temperature and low-carbon (“dual-low”) conditions, hindering sustainable nitrogen removal. Biofilm systems, though energy-efficient, suffer from reduced efficiency in such environments due to impaired interspecies electron transfer (IET). Granular activated carbon (GAC), a conductive mediator, offers potential to enhance IET between electroactive microorganisms (EAMs) and denitrifiers, yet its role in dual-low systems remains underexplored. This study investigates GAC’s capacity to optimize biofilm functionality and mitigate greenhouse gas (GHG) emissions under these constraints. Results: Under dual-low conditions (4–6°C, C/N = 4), GAC increased denitrification efficiency by 19.4–21.9% and reduced N2O emissions by 10.6–22.9%. Metatranscriptomes revealed upregulation of denitrifying genes (e.g., nosZ) and electron transport pathways (e.g., omcB in Geobacter). FISH/SEM confirmed GAC-driven coacervates of EAMs and denitrifiers, linked by nanowires, enhancing direct electron transfer. Microbial diversity decreased, but functional redundancy improved, with Pseudomonas fluorescens and Geobacter sulfurreducens dominating. TOC removal rose under low temperatures, indicating enhanced carbon utilization. Conclusions: GAC fosters synergistic EAM-denitrifier partnerships, enabling efficient denitrification and GHG mitigation in cold and carbon-limited (“dual-low”) biofilm systems, advancing sustainable wastewater management. ...
Journal article (2024) - Mingchen Yao, Anran Ren, Xiangyu Yang, Lihua Chen, Xun Wang, Walter van der Meer, Mark C.M. van Loosdrecht, Gang Liu, Martin Pabst
Shower systems provide unique environments that are conducive to biofilm formation and the proliferation of pathogens. The water heating temperature is a delicate decision that can impact microbial growth, balancing safety and energy consumption. This study investigated the impact of different heating temperatures (39 °C, 45 °C, 51 °C and 58 °C) on the shower hose biofilm (exposed to a final water temperature of 39 °C) using controlled full-scale shower setups. Whole metagenome sequencing and metaproteomics were employed to unveil the microbial composition and protein expression profiles. Overall, the genes and enzymes associated with disinfectant resistance and biofilm formation appeared largely unaffected. However, metagenomic analysis revealed a sharp decline in the number of total (86,371 to 34,550) and unique genes (32,279 to 137) with the increase in hot water temperature, indicating a significant reduction of overall microbial complexity. None of the unique proteins were detected in the proteomics experiments, suggesting smaller variation among biofilms on the proteome level compared to genomic data. Furthermore, out of 43 pathogens detected by metagenomics, only 5 could actually be detected by metaproteomics. Most interestingly, our study indicates that 45 °C heating temperature may represent an optimal balance. It minimizes active biomass (ATP) and reduces the presence of pathogens while saving heating energy. Our study offered new insights into the impact of heating temperature on shower hose biofilm formation and proposed optimal parameters that ensure biosafety while conserving energy. ...

Microbial succession and organic transformation at molecular level

Journal article (2024) - Mengqing Fan, Anran Ren, Mingchen Yao, Xiaoming Li, Walter van der Meer, Guo Yu, Gertjan Medema, Joan Rose, Gang Liu
Drinking water distribution systems are increasingly vulnerable to sewage intrusion due to aging water infrastructure and intensifying water stress. While the health risks associated with sewage intrusion have been extensively studied, little is known about the impacts of intruded bacteria and dissolved organic matter (DOM) on microbiology in drinking water. In this dynamic study, we demonstrate that the intrusion of 1 % sewage into tap water resulted in immediate contamination, including an 8-fold increase in biomass (TCC), a 48.9 % increase in bacterial species (ASVs), a 12.5 % increase in organic carbon content (DOC), and a 13.5 % increase in unique DOM molecular formulae. Over time, sewage intrusion altered tap water microbiology by accelerating bacterial growth rates (5-fold faster), selectively promoting ASVs in community succession, and producing 998 more unique DOM formulae. More significantly, statistical analysis revealed that the intrusion of 1 % sewage shifted the driving force of bacterial and DOM composition covariance from a DOM-dependent process in tap water to a bacterial-governed process post-intrusion. Our results clearly demonstrate the disruptive effects of sewage intrusion into tap water, emphasizing the urgent need to consider the long-lasting impacts of sewage intrusion in drinking water distribution systems, in addition to its immediate health risks. ...
Journal article (2024) - Yue Zhang, Xiaoming Li, Anran Ren, Mingchen Yao, Chen Chen, Haichen Zhang, Walter van der Meer, Gang Liu
Treated drinking water is delivered to customers through drinking water distribution systems (DWDSs). Although studies have focused on exploring the microbial ecology of DWDSs, knowledge about the effects of different water treatments on the bacterial community of biofilm and loose deposits in DWDS is limited. This study assessed the effects of additional treatments on the bacterial communities developed in 10 months’ old pilot DWDSs. The results showed a similar bacterial community in the pipe-wall biofilm, which was dominated by Novosphingobium spp. (20–82 %) and Sphingomonas spp. (11–53 %), regardless of the treatment applied. The bacterial communities that were retained in the distribution systems (including pipe-wall biofilm and loose deposits) were similar to the particle-associated bacteria (PAB) in the corresponding supply water. The additional treatments showed clear effects of the removal and/or introduction of particles. The genera Aeromonas spp., Clostridium spp., Legionella spp., and Pseudomonas spp., which contain opportunistic pathogenic species, were only detected among the PAB in ion exchange system. Our study demonstrated that the biofilm community is consistent across treatments, and the contribution from bacteria in loose deposits is important but can be controlled by removing particles. These findings offer more insight into the origin and development of microbial ecology in DWDSs and suggest paths for further research on the possibility of managing the microbial ecology in distribution systems. ...
Journal article (2024) - Anran Ren, Mingchen Yao, Jiaxing Fang, Zihan Dai, Xiaoming Li, Walter van der Meer, Gertjan Medema, Joan B. Rose, Gang Liu
Although simulated studies have provided valuable knowledge regarding the communities of planktonic bacteria and biofilms, the lack of systematic field studies have hampered the understanding of microbiology in real-world service lines and premise plumbing. In this study, the bacterial communities of water and biofilm were explored, with a special focus on the lifetime development of biofilm communities and their key influencing factors. The 16S rRNA gene sequencing results showed that both the planktonic bacteria and biofilm were dominated by Proteobacteria. Among the 15,084 observed amplicon sequence variants (ASVs), the 33 core ASVs covered 72.8 %, while the 12 shared core ASVs accounted for 62.2 % of the total sequences. Remarkably, it was found that the species richness and diversity of biofilm communities correlated with pipe age. The relative abundance of ASV2 (f_Sphingomonadaceae) was lower for pipe ages 40–50 years (7.9 %) than for pipe ages 10–20 years (59.3 %), while the relative abundance of ASV10 (f_Hyphomonadaceae) was higher for pipe ages 40–50 years (19.5 %) than its presence at pipe ages 20–30 years (1.9 %). The community of the premise plumbing biofilm had significantly higher species richness and diversity than that of the service line, while the steel-plastics composite pipe interior lined with polyethylene (S-PE) harbored significantly more diverse biofilm than the galvanized steel pipes (S-Zn). Interestingly, S-PE was enriched with ASV27 (g_Mycobacterium), while S-Zn pipes were enriched with ASV13 (g_Pseudomonas). Moreover, the network analysis showed that five rare ASVs, not core ASVs, were keystone members in biofilm communities, indicating the importance of rare members in the function and stability of biofilm communities. This manuscript provides novel insights into real-world service lines and premise plumbing microbiology, regarding lifetime dynamics (pipe age 10–50 years), and the influences of pipe types (premise plumbing vs. service line) and pipe materials (S-Zn vs. S-PE). ...
Journal article (2024) - Di Wang, Anran Ren, Mingchen Yao, Bin Hu, Walter van der Meer, Gang Liu
Drinking water biosafety has become an increasing concern for public health. Chlorination is widely used as the main disinfection strategy worldwide but has clear and well-known byproduct issues. The Netherlands has successfully demonstrated unchlorinated approach for almost 20 years but has not been widely adopted by other countries. To chlorine or not chlorine is becoming a critical question in front of all the water utilities. This review aims to provide a good overview of current biosafety management strategies, their disadvantages, as well as the latest developments and future trends. Firstly, the advantages and deficiencies of conventional disinfection and non-disinfection were discussed. Secondly, the commonly used and promising methods for biostability assessment are described. Finally, critical views on the strategy selection for ensuring drinking water biosafety were discussed. It is recommended to achieve both biological and chemical balance by removing pathogens while minimizing the organic matter and dosing a minimum level of disinfectants, which would represent the compromise choice between the current chlorine-based disinfection and chlorine-free strategy. It's worth noting that the complexity of ensuring biosafety lies in the variations among different regions, the selection of suitable methods should be tailored to specific situations on a case-by-case basis. ...