Nanopore Sequencing of Peptides

Terminal Conjugation and PTM Detection

Doctoral Thesis (2026)
Author(s)

J. Ritmejeris (TU Delft - BN/Cees Dekker Lab)

Contributor(s)

C. Dekker – Promotor (TU Delft - BN/Cees Dekker Lab)

C. Joo – Promotor (TU Delft - BN/Chirlmin Joo Lab)

DOI related publication
https://doi.org/10.4233/uuid:08711975-9182-433f-99b4-ec13cb172acb Final published version
More Info
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Publication Year
2026
Language
English
Defense Date
15-04-2026
Awarding Institution
ISBN (print)
978-94-6384-943-2
Downloads counter
23
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Abstract

In this thesis, I present the development of biophysical and chemical strategies to enable single-molecule protein sequencing using biological nanopores. While genomic sequencing has transformed biology by enabling the massive-scale amplification and sequencing of nucleic acids, a comparable revolution in proteomics has remained elusive. Proteins cannot be amplified, and existing techniques – most prominently mass spectrometry – rely on ensemble averaging, destroying labile modifications and masking molecular heterogeneity. The aim of this thesis was to develop a framework for direct amplification-free analysis of individual peptides using nanopore-based sequencing....

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File under embargo until 15-04-2027