WEBRSIM
A web-based reaction systems simulator
Sergiu Ivanov (Université Évry)
Vladimir Rogojin (Turku Centre for Computer Science, Åbo Akademi University)
Sepinoud Azimi (Åbo Akademi University, Turku Centre for Computer Science)
Ion Petre (Åbo Akademi University, Turku Centre for Computer Science, National Institute for Research and Development in Biological Sciences)
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Abstract
We introduce WEBRSIM, the first web-based simulator for reaction systems. The simulator has an easy-to-use interface where the input is a reaction system and four functionalities: the computation of the interactive process driven by a given context sequence, the behaviour graph of the reaction system, its conservation dependency graph, and all its conserved sets. WEBRSIM comes with a browser-based friendly interface and offers a fast software to support computational modeling with reaction systems.