Large language models as oracles for instantiating ontologies with domain-specific knowledge

Journal Article (2025)
Author(s)

Giovanni Ciatto (Alma Mater Studiorum – Universitá di Bologna)

Andrea Agiollo (TU Delft - Cyber Security)

Matteo Magnini (Alma Mater Studiorum – Universitá di Bologna)

Andrea Omicini (Alma Mater Studiorum – Universitá di Bologna)

Research Group
Cyber Security
DOI related publication
https://doi.org/10.1016/j.knosys.2024.112940
More Info
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Publication Year
2025
Language
English
Research Group
Cyber Security
Volume number
310
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Abstract

Background:
Endowing intelligent systems with semantic data commonly requires designing and instantiating ontologies with domain-specific knowledge. Especially in the early phases, those activities are typically performed manually by human experts possibly leveraging on their own experience. The resulting process is therefore time-consuming, error-prone, and often biased by the personal background of the ontology designer.

Objective:
To mitigate that issue, we propose a novel domain-independent approach to automatically instantiate ontologies with domain-specific knowledge, by leveraging on large language models (LLMs) as oracles.

Methods:
Starting from (i) an initial schema composed by inter-related classes and properties and (ii) a set of query templates, our method queries the LLM multiple times, and generates instances for both classes and properties from its replies. Thus, the ontology is automatically filled with domain-specific knowledge, compliant to the initial schema. As a result, the ontology is quickly and automatically enriched with manifold instances, which experts may consider to keep, adjust, discard, or complement according to their own needs and expertise.

Contribution:
We formalise our method in general way and instantiate it over various LLMs, as well as on a concrete case study. We report experiments rooted in the nutritional domain where an ontology of food meals and their ingredients is automatically instantiated from scratch, starting from a categorisation of meals and their relationships. There, we analyse the quality of the generated ontologies and compare ontologies attained by exploiting different LLMs. Experimentally, our approach achieves a quality metric that is up to five times higher than the state-of-the-art, while reducing erroneous entities and relations by up to ten times. Finally, we provide a SWOT analysis of the proposed method.