A system-wide approach to monitor responses to synergistic BRAF and EGFR inhibition in colorectal cancer cells

Journal Article (2018)
Author(s)

Anna Ressa (Universiteit Utrecht)

Evert Bosdriesz (Nederlands Kanker Instituut - Antoni van Leeuwenhoek ziekenhuis)

Joep De Ligt ( University Medical Centre Utrecht)

Sara Mainardi (Nederlands Kanker Instituut - Antoni van Leeuwenhoek ziekenhuis)

Gianluca Maddalo (Universiteit Utrecht)

Anirudh Prahallad (Nederlands Kanker Instituut - Antoni van Leeuwenhoek ziekenhuis)

Myrthe Jager ( University Medical Centre Utrecht)

Lisanne De La Fonteijne ( University Medical Centre Utrecht)

Martin Fitzpatrick (Universiteit Utrecht)

Stijn Groten (Universiteit Utrecht)

A.F. Maarten Altelaar (Universiteit Utrecht)

René Bernards (Nederlands Kanker Instituut - Antoni van Leeuwenhoek ziekenhuis)

Edwin Cuppen ( University Medical Centre Utrecht)

Lodewyk Wessels (TU Delft - Pattern Recognition and Bioinformatics, Nederlands Kanker Instituut - Antoni van Leeuwenhoek ziekenhuis)

Albert J.R. Heck (Universiteit Utrecht)

DOI related publication
https://doi.org/10.1074/mcp.RA117.000486 Final published version
More Info
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Publication Year
2018
Language
English
Journal title
Molecular and Cellular Proteomics
Issue number
10
Volume number
17
Pages (from-to)
1892-1908
Downloads counter
294

Abstract

Intrinsic and/or acquired resistance represents one of the great challenges in targeted cancer therapy. A deeper understanding of the molecular biology of cancer has resulted in more efficient strategies, where one or multiple drugs are adopted in novel therapies to tackle resistance. This beneficial effect of using combination treatments has also been observed in colorectal cancer patients harboring the BRAF(V600E) mutation, whereby dual inhibition of BRAF(V600E) and EGFR increases antitumor activity. Notwithstanding this success, it is not clear whether this combination treatment is the only or most effective treatment to block intrinsic resistance to BRAF inhibitors. Here, we investigate molecular responses upon single and multi-target treatments, over time, using BRAF(V600E) mutant colorectal cancer cells as a model system. Through integration of transcriptomic, proteomic and phosphoproteomics data we obtain a comprehensive overview, revealing both known and novel responses. We primarily observe widespread up-regulation of receptor tyrosine kinases and metabolic pathways upon BRAF inhibition. These findings point to mechanisms by which the drug-treated cells switch energy sources and enter a quiescent-like state as a defensive response, while additionally compensating for the MAPK pathway inhibition.