An optimized fast-repetition-rate fluorometry method reveals photochemical flux bottlenecks in C3 photosynthesis that limit carboxylation and growth

Journal Article (2026)
Author(s)

Gennady Ananyev (Rutgers University - Livingston Campus)

Marie Claire ten Veldhuis (TU Delft - Civil Engineering & Geosciences)

Apostolos Zournas (Rutgers University - Livingston Campus)

Colin Gates (Rutgers University - Livingston Campus)

G. Charles Dismukes (Rutgers University - Livingston Campus)

Research Group
Water Systems Monitoring & Modelling
DOI related publication
https://doi.org/10.1016/j.molp.2026.05.023 Final published version
More Info
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Publication Year
2026
Language
English
Research Group
Water Systems Monitoring & Modelling
Journal title
Molecular Plant
Issue number
8
Volume number
19
Pages (from-to)
1663-1677
Page Views
58
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Abstract

Using the fast-repetition-rate fluorometry (FRRF) technique to monitor the variable yield of chlorophyll fluorescence emission (Fv = Fm − Fo), we develop a pulse sequence to measure flux bottlenecks that limit the transport of electrons and protons from their water oxidation source through the photosynthetic electron transport chain (PETC) into CO
2 carboxylation and triose phosphate production within the Calvin–Benson–Bassham (CBB) cycle of living organisms. FRRF uses a single source of microsecond flashes to excite photochemistry and produce fluorescence, thus removing slower non-photochemical quenching contributions to total Fv (pFv = total Fv − NPQ). pFv is the fraction of total Fv that originates from net charge separation and recombination in photosystem II: P ↔ P∗ ↔ P
+Q
A
− ↔.. Subsequent charge-transfer steps are monitored, revealing fluxes from water oxidation (reducing P
+) into downstream carrier pools of the PETC (oxidizing Q
A
−). As these pools fill in sequence, Q
A/Q
A
− repopulates at characteristic lag times as measured by pFv dynamics. Three temporal phases of pFv are observable in various phototrophs performing C
3 photosynthesis that reveal five flux bottlenecks between redox carriers in the PETC and CBB cycle. pFv dynamics reveal that the PETC and CBB cycles operate synchronously, governed by the law of mass action and microscopic reversibility, with CO
2 accelerating upstream reactions in both linear and cyclic electron pathways. pFv fluxes reliably monitor species-dependent phenotypic changes in PETC/CBB bottlenecks that determine carboxylation rate and influence cellular growth rate. This versatile technique can be applied to monitor the effects of transgene or environmental changes on light-use efficiency in diverse photosynthetic organisms.

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