Revealing neurocognitive and behavioral patterns through unsupervised manifold learning of dynamic brain data

Journal Article (2025)
Author(s)

Zixia Zhou (Stanford University)

Junyan Liu (Stanford University)

Wei Emma Wu (Stanford University)

Ruogu Fang (University of Florida)

Sheng Liu (Stanford University)

Qingyue Wei (Stanford University)

Rui Yan (Stanford University)

Yi Guo (Fudan University)

Q. Tao (TU Delft - Applied Sciences)

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Research Group
ImPhys/Tao group
DOI related publication
https://doi.org/10.1038/s43588-025-00911-9 Final published version
More Info
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Publication Year
2025
Language
English
Research Group
ImPhys/Tao group
Bibliographical Note
Green Open Access added to TU Delft Institutional Repository as part of the Taverne amendment. More information about this copyright law amendment can be found at https://www.openaccess.nl. Otherwise as indicated in the copyright section: the publisher is the copyright holder of this work and the author uses the Dutch legislation to make this work public.
Journal title
Nature Computational Science
Issue number
12
Volume number
5
Pages (from-to)
1238-1252
Downloads counter
130
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Abstract

Dynamic brain data are becoming increasingly accessible, providing a gateway to understanding the inner workings of the brain in living participants. However, the size and complexity of the data pose a challenge in extracting meaningful information across various data sources. Here we introduce a generalizable unsupervised deep manifold learning for exploration of neurocognitive and behavioral patterns. Unlike existing methods that extract patterns directly from the input data, the proposed brain-dynamic convolutional-network-based embedding (BCNE) captures brain-state trajectories by analyzing temporospatial correlations within the data and applying manifold learning. The results demonstrate that BCNE effectively delineates scene transitions, underscores the involvement of different brain regions in memory and narrative processing, distinguishes dynamic learning processes and identifies differences between active and passive behaviors. BCNE provides an effective tool for exploring general neuroscience inquiries or individual-specific patterns.

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