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Estrada Bonilla, B.A. (author), Martins Costa, A.R. (author), van den Berg, D.F. (author), van Rossum, T. (author), Hagedoorn, Stefan (author), Walinga, Hielke (author), Xiao, Minfeng (author), Haas, Pieter Jan (author), Brouns, S.J.J. (author)Bacteriophages are an invaluable source of novel genetic diversity. Sequencing of phage genomes can reveal new proteins with potential uses as biotechnological and medical tools, and help unravel the diversity of biological mechanisms employed by phages to take over the host during viral infection. Aiming to expand the available collection of...journal article 2021
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Sorokin, Dimitry Y. (author), Mosier, Damon (author), Zorz, J.K.T. (author), Dong, Xiaoli (author), Strous, Marc (author)A new haloalkaliphilic species of Wenzhouxiangella, strain AB-CW3, was isolated from a system of hypersaline alkaline soda lakes in the Kulunda Steppe using cells of Staphylococcus aureus as growth substrate. AB-CW3’s complete, circular genome was assembled from combined nanopore and Illumina sequencing and its proteome was determined for...journal article 2020
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Georgescu, C.H. (author), Manson McGuire, Abigail L. (author), Griggs, Alexander D. (author), Desjardins, Christopher A. (author), Pironti, Alejandro (author), Wapinski, Ilan (author), Abeel, T.E.P.M.F. (author), Haas, Brian J. (author), Earl, Ashlee M. (author)Accurate orthologue identification is a vital component of bacterial comparative genomic studies, but many popular sequence-similarity-based approaches do not scale well to the large numbers of genomes that are now generated routinely. Furthermore, most approaches do not take gene synteny into account, which is useful information for...journal article 2018