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J. P. Frimat

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Suppression of auto-fluorescence from high-resolution 3D polymeric architectures fabricated via two-photon polymerization for cell biology applications

Journal article - A.M.S.E. Sharaf, J. P. Frimat, Gert Jan Kremers, A. Accardo

Two-photon polymerization (2PP) has provided the field of cell biology with the opportunity to fabricate precisely designed microscaffolds for a wide range of studies, from mechanobiology to in vitro disease modelling. However, a multitude of commercial and in-house developed photosensitive materials employed in 2PP suffers from high auto-fluorescence in multiple regions of the spectrum. In the context of in vitro cell biological studies, this is a major problem since one of the main methods of characterization is fluorescence microscopy of immuno-stained cells. This undesired auto-fluorescence of microscaffolds affects the efficiency of such an analysis as it often overlaps with fluorescent signals of stained cells rendering them indistinguishable from the scaffolds. Here, we propose two effective solutions to suppress this auto-fluorescence and compare them to determine the superiority of one over the other: photo-bleaching with a powerful UV point source and auto-fluorescence quenching via Sudan Black B (SBB). The materials used in this study were all commercially available, namely IP-L, IP-Dip, IP-S, and IP-PDMS. Bleaching was shown to be 61.7–92.5% effective in reducing auto-fluorescence depending on the material. On the other hand, SBB was shown to be 33–95.4% effective. The worst result in presence of SBB (33%) was in combination with IP-PDMS since the adsorption of the material on IP-PDMS was not sufficient to fully quench the auto-fluorescence. However, auto-fluorescence reduction was significantly enhanced when activating the IP-PDMS structures with oxygen plasma for 30 s. Moreover, we performed a cell culture assay using a human neuroblastoma cell line (SH-SY5Y) to prove the effectiveness of both methods in immunofluorescence characterization. SBB presented a lower performance in the study especially in presence of 2PP-fabricated microchannels and microcages, within which the differentiated SH-SY5Y cells migrated and extended their axon-like processes, since the SBB obstructed the fluorescence of the stained cells. Therefore, we concluded that photo-bleaching is the optimal way of auto-fluorescence suppression. In summary, this study provides a systematic comparison to answer one of the most pressing issues in the field of 2PP applied to cell biology and paves the way to a more efficient immunofluorescence characterization of cells cultured within engineered in vitro microenvironments.@en

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Two-photon polymerization-based 3D-multi-electrode arrays for electrical monitoring of neuronal cells

Master thesis - T.P. Michalica, A. Accardo, Massimo Mastrangeli, J. P. Frimat, E. Yarali, T.M. Lopes Marta da Costa, Sophinese Iskander-Rizk

3D-multi-electrode arrays (3D-MEAs) are needed to overcome the limitations of 2D-multi-electrode arrays (2D-MEAs) and enable the electrical characterization of 3D neuronal cultures in in vitro brain models, advancing the understanding of neurological disorders and paving the way to personalized medicine. The aim of this thesis was to overcome some of the limitations of current 3D-MEA devices and develop structures approaching the stiffness of the brain microenvironment, by using materials softer than conventional Silicon.A polymeric 3D-MEA was designed and developed by means of an innovative combination of two-photon polymerization (2PP), a 3D printing technology with sub-micrometer resolution, and standard wafer-level microfabrication methods from the semiconductor industry. Two novel fabrication protocols were developed, the first being a combination of 2PP with high-aspect ratio photolithography, which, though feasible, proved to require an inconveniently laborious process flow. The second fabrication process employed instead 2PP to fabricate the polymeric structures, pattern the microelectrodes, and provide electrical insulation. The 2PP-based process flow was ultimately preferred due to its potential for fabrication of structures of higher aspect ratio and geometrical complexity for 3D-MEA, extending their measurement resolution. Furthermore, a wafer-level alignment routine was developed with an alignment repeatability of 2PP structures of ±5 µm, which enabled the multi-step 2PP fabrication process. A novel maskless photolithography via 2PP process was also developed to pattern thin films over slanted surfaces, utilizing photoresist and glycerol-based immersion optics. The resulting 3D-MEA consisted of 15 printed polymeric pyramids featuring a total of 60 gold microelectrodes. The electrical insulation of the traces was partially successful, and will require further process development.The results demonstrate the feasibility of merging, for the first time, the 2PP process with standard wafer-level microfabrication techniques, specifically for the fabrication of a 3D-MEA for in vitro studies of human induced pluripotent stem cell (hiPSC) neuronal cultures. The 2PP-based solutions provided in this thesis show a promising pathway for the development of more complex and biomimetic 3D-MEAs. More generally, the developed wafer-level alignment routine and maskless photolithography via 2PP process for high-aspect ratio structures contribute to advance the field of microfabrication, and may enable the development of other types of innovative microdevices.