Finding vehicles for biosynthesis of metal clusters with advantageous magnetic and catalytic properties is an important industrial and environmental task. We have found previously that green microalga Chlorella sorokiniana produces a multivalent Mn-O cluster with structure that is similar to photosynthetic oxygen-evolving complex (OEC). Here we reported magnetic and redox properties and the site of accumulation of this cluster, and we proposed the mechanisms of biosynthesis and the protocol for extraction. The cluster was paramagnetic even at room temperature, with an antiferromagnetic transition at ∼13 K. The separation between ground and excited state of ΔE ≈ 15.0 cm⁻¹ matched the separation energy of OEC in S₂ state. Nano X-ray fluorescence microscopy and ³¹P NMR showed that the cluster is accumulated in acidocalcisomes, a lysosome-type organelles rich in polyphosphates. The conditions in these organelles resemble the settings of chemical synthesis of OEC mimics, including mildly acidic pH and the availability of Ca²⁺ ions. Polyphosphates are likely to play a role of stabilizing ligands and modulators of redox properties of Mn²⁺ in the cluster synthesis. The cluster shares redox potentials with OEC and showed catalase-like activity. However, we could not confirm OEC-like performance because the cluster was prone to degradation by oxidizing agents in the presence of organic residue in the extract. The biosynthesis showed an overall yield of ∼25 % and appears to be cost-competitive with chemical synthesis. This study shows that metabolic trades of selected microalgae can be employed in the green synthesis of catalytically functional clusters.