Microbially induced carbonate precipitation (MICP) involves bacteria to drive calcite precipitation and naturally cement soils, thereby improving soils performance. Experimental studies have shown that bio-cemented specimen can suffer from severe spatial inhomogeneity of the calcite content, leading to large uncertainty in treatment efficiency prediction. To evaluate the effect of inhomogeneity on the mechanical behaviour of bio-cemented soils, the discrete element method (DEM) is used to model bio-cemented samples with a single carbonate distribution pattern (i.e. either bridging or contact cementing) but different characteristics of inhomogeneity. Both drained triaxial compression and triaxial extension simulations are carried out to evaluate the impact of inhomogeneity along different loading paths. The results indicate that inhomogeneity has different effects on bio-cemented samples depending on the carbonate distribution patterns and the loading path. Specifically, the shear strength in compression of samples exhibiting bridging cementation is largely affected by inhomogeneity, while the effect on shear strength in extension is negligible. On the other hand, samples with contact cementing show limited sensitivity to the variation of inhomogeneity under both triaxial compression and triaxial extension tests.@en

Microbially induced carbonate precipitation is a promising ground improvement technique which can enhance the mechanical properties of soils through the precipitation of calcium carbonate. Experimental evidences indicate that the precipitated carbonate can display different distribution patterns. Crystals can develop at grain–grain contacts (contact cementing), connect soil grains that were initially not in contact with each other (bridging), precipitate on the grain surface (coating), or fill in the void space (pore filling). This paper investigates the role of the aforementioned distribution patterns on the mechanical behaviour of lightly bio-cemented soil samples using discrete element modelling. Bio-cemented samples with different distribution patterns and carbonate contents are built, and a series of drained triaxial compression simulations are carried out at different confining pressures. The results show that cementation in the form of bridging and contact cementing leads to obvious improvement in stiffness, strength and dilatancy. In contrast, cementation in the form of coating contributes only slightly to mechanical improvement, and pore filling exhibits negligible influence on the mechanical response of the material. The findings suggest that, to gain strength improvement in the most effective way, treatments should be tailored to precipitate calcium carbonate crystals in the form of bridging.@en

Bio-cemented soils can exhibit various types of microstructure depending on the relative position of the carbonate crystals with respect to the host granular skeleton. Different microstructures can have different effects on the mechanical and hydraulic responses of the material, hence it is important to develop the capacity to model these microstructures. The discrete element method (DEM) is a powerful numerical method for studying the mechanical behaviour of granular materials considering grain-scale features. This paper presents a toolbox that can be used to generate 3D DEM samples of bio-cemented soils with specific microstructures. It provides the flexibility of modelling bio-cemented soils with precipitates in the form of contact cementing, grain bridging and coating, and combinations of these distribution patterns. The algorithm is described in detail in this paper, and the impact of the precipitated carbonates on the soil microstructure is evaluated. The results indicate that carbonates precipitated in different distribution patterns affect the soil microstructure differently, suggesting the importance of modelling the microstructure of bio-cemented soils.@en