The resiliency of coral reef islands to changing environments associated with climate change is controlled by the delicate balance between the import and export of sediment. The majority of the sediment is derived from coral reefs for which the stability of these islands is directly related to reef health. Understanding the sediment signature and its drivers is essential to assess island resiliency. We performed a study on sediments from the islands Eva and Fly in the Exmouth Gulf, Australia. We analysed the grainsize distribution and the abundance of sediment producers in order to desribe and discriminate the spatial distribution of these sediment characteristics and performed statistical analysis to identify corresponding key environmental drivers. We found that the sediments were typically course sand-sized (500 − 1000 [μm]) and the dominant constituent is reef-derived sediment. The median grainsize of Eva island (549 [μm]) is nearly equal to the median grainsize of Fly island (540 [μm]). The standard deviation of the grain size distribution of the sediments from Eva island was much larger than at Fly island. However, analysis of variance showed there were no significant differences between islands (Eva/Fly), hydrodynamic regimes (high/low), distance to shore (inshore/offshore) and local habitat (reef/no reef). Furthermore, a distance-based redundancy analysis showed no key environmental driver responsible for the distribution in grainsize and composition of the sediment. The environmental factors which were analyses were depth, temperature, pH, dissolved oxygen content and the oxidation-reduction potential. The spatiotemporal scales that were studied are potentially smaller than the scales on which climate change effects act, which explains the absence of significant spatial differences or key environmental drivers. Based on these findings it is not possible to assess the resiliency of Eva and Fly islands, however a study from Perry et al. (2011) found that islands with their particular characteristics (sand-sized and coral-dominated) are expected to undergo major morphological change under a range of predicted climate change scenarios. This research provides a baseline for future studies to assess the stability of Eva and Fly islands or sedimentological research other reef-derived islands.