In vitro reconstitution of dynamic co-organization of microtubules and actin filaments in emulsion droplets
Kim J.A. Vendel (Kavli institute of nanoscience Delft, TU Delft - BN/Marileen Dogterom Lab)
Celine Alkemade (TU Delft - BN/Marileen Dogterom Lab, AMOLF Institute for Atomic and Molecular Physics, Kavli institute of nanoscience Delft)
Nemo Andrea (TU Delft - BN/Marileen Dogterom Lab, Kavli institute of nanoscience Delft)
Gijsje H. Koenderink (TU Delft - BN/Gijsje Koenderink Lab, AMOLF Institute for Atomic and Molecular Physics)
Marileen Dogterom (Kavli institute of nanoscience Delft, TU Delft - BN/Bionanoscience)
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Abstract
In vitro (or cell-free) reconstitution is a powerful tool to study the physical basis of cytoskeletal organization in eukaryotic cells. Cytoskeletal reconstitution studies have mostly been done for individual cytoskeleton systems in unconfined 3D or quasi-2D geometries, which lack complexity relative to a cellular environment. To increase the level of complexity, we present a method to study co-organization of two cytoskeletal components, namely microtubules and actin filaments, confined in cell-sized water-in-oil emulsion droplets. We show that centrosome-nucleated dynamic microtubules can be made to interact with actin filaments through a tip-tracking complex consisting of microtubule end-binding proteins and an actin-microtubule cytolinker. In addition to the protocols themselves, we discuss the optimization steps required in order to build these more complex in vitro model systems of cytoskeletal interactions.