The use of patient reported outcome measures in oncology clinical practice across Australia and New Zealand

Background: While there is increasing evidence on the benefits of PROMs in cancer care, the extent of routine collection and use of PROMs in clinical cancer practice across Australia and New Zealand (ANZ) is unknown. This study examined the prevalence and characteristics of PROMs use in routine clinical cancer care in ANZ. Methods: An online...

Mortality risk from United States coal electricity generation

Policy-makers seeking to limit the impact of coal electricity-generating units (EGUs, also known as power plants) on air quality and climate justify regulations by quantifying the health burden attributable to exposure from these sources. We defined “coal PM2.5” as fine particulate matter associated with coal EGU sulfur dioxide emissions and...

High-dimensional scaling limits of piecewise deterministic sampling algorithms

Piecewise deterministic Markov processes are an important new tool in the design of Markov chain Monte Carlo algorithms. Two examples of fundamental importance are the bouncy particle sampler (BPS) and the zig–zag process (ZZ). In this paper scaling limits for both algorithms are determined. Here the dimensionality of the space tends towards...

Crumbling Reefs and Cold-Water Coral Habitat Loss in a Future Ocean: Evidence of “Coralporosis” as an Indicator of Habitat Integrity

Ocean acidification is a threat to the net growth of tropical and deep-sea coral reefs, due to gradual changes in the balance between reef growth and loss processes. Here we go beyond identification of coral dissolution induced by ocean acidification and identify a mechanism that will lead to a loss of habitat in cold-water coral reef...

Cable bacteria promote DNRA through iron sulfide dissolution

Cable bacteria represent a newly discovered group of filamentous microorganisms, which are capable of spatially separating the oxidative and reductive half-reactions of their sulfide-oxidizing metabolisms over centimeter distances. We investigated three ways that cable bacteria might interact with the nitrogen (N) cycle: (1) by reducing...

The Zig-Zag process and super-efficient sampling for Bayesian analysis of big data

Standard MCMC methods can scale poorly to big data settings due to the need to evaluate the likelihood at each iteration. There have been a number of approximate MCMC algorithms that use sub-sampling ideas to reduce this computational burden, but with the drawback that these algorithms no longer target the true posterior distribution. We...

Piecewise deterministic Markov processes for scalable Monte Carlo on restricted domains

Piecewise Deterministic Monte Carlo algorithms enable simulation from a posterior distribution, whilst only needing to access a sub-sample of data at each iteration. We show how they can be implemented in settings where the parameters live on a restricted domain.

Piecewise Deterministic Markov Processes for Continuous-Time Monte Carlo

Recently, there have been conceptually new developments in Monte Carlo methods through the introduction of new MCMC and sequential Monte Carlo (SMC) algorithms which are based on continuous-time, rather than discrete-time, Markov processes. This has led to some fundamentally new Monte Carlo algorithms which can be used to sample from, say, a...

Passive seismic reflection interferometry: A case study from the aquistore CO₂ storage site, Saskatchewan, Canada

Seismic reflection interferometry has recently been tested in a few resource-exploration applications. We have evaluated passive seismic interferometry results for data from the Aquistore CO₂ storage site, Saskatchewan, Canada, with the objective of testing the method's ability to image the subsurface geology and its potential for...

A piecewise deterministic scaling limit of lifted Metropolis-Hastings in the Curie-Weiss model

In Turitsyn, Chertkov and Vucelja [Phys. D 240 (2011) 410-414] a nonreversible Markov Chain Monte Carlo (MCMC) method on an augmented state space was introduced, here referred to as Lifted Metropolis-Hastings (LMH). A scaling limit of the magnetization process in the Curie-Weiss model is derived for LMH, as well as for Metropolis-Hastings (MH...

Uncertainty Quantification for a Sailing Yacht Hull, Using Multi-Fidelity Kriging

Uncertainty Quantication (UQ) for CFD-based ship design can require a large number of simulations, resulting in signicant overall computational cost. Presently, we use an existing method, multi-delity Kriging, to reduce the number of simulations required for the UQ analysis of the performance of a sailing yacht hull, considering uncertainties in...

Hindcast and validation of Hurricane Ike (2008) waves, forerunner, and storm surge

Hurricane Ike (2008) made landfall near Galveston, Texas, as a moderate intensity storm. Its large wind field in conjunction with the Louisiana-Texas coastline's broad shelf and large scale concave geometry generated waves and surge that impacted over 1000 km of coastline. Ike's complex and varied wave and surge response physics included: the...

Strains and Deflections of GFRP Sandwich Panels Due to Uniform Out-of-Plane Pressure

Candida sorbosivorans sp. nov., a new member of the genus Candida Berkhout

Three new species in the Saccharomyces sensu stricto complex: Saccharomyces cariocanus, Saccharomyces kudriavzevii and Saccharomyces mikatae

Experimental results for bending and buckling of rectangular orthotropic fiber-reinforced plastic plate structures

A review of warship motion control research undertaken at RNEC Manadon