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Ossenkoppele, B.W. (author), Luijten, Ben (author), Bera, Deep (author), de Jong, N. (author), Verweij, M.A. (author), van Sloun, Ruud J.G. (author)
There is an increased desire for miniature ultrasound probes with small apertures to provide volumetric images at high frame rates for in-body applications. Satisfying these increased requirements makes simultaneous achievement of a good lateral resolution a challenge. As micro-beamforming is often employed to reduce data rate and cable count...
journal article 2023
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Klein, M. (author), Bera, Subhas C. (author), Anderson, Thomas K. (author), Wang, Bing (author), Papini, Flavia S. (author), Arnold, Jamie J. (author), Cameron, Craig E. (author), Depken, S.M. (author), Dulin, D. (author)
journal article 2023
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Bera, Subhas C. (author), America, Pim P.B. (author), Maatsola, Santeri (author), Seifert, Mona (author), Ostrofet, Eugeniu (author), Cnossen, J.P. (author), Spermann, Monika (author), Depken, S.M. (author), Dulin, D. (author)
Transcription initiation is the first step in gene expression, and is therefore strongly regulated in all domains of life. The RNA polymerase (RNAP) first associates with the initiation factor σ to form a holoenzyme, which binds, bends and opens the promoter in a succession of reversible states. These states are critical for transcription...
journal article 2022
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Pols, C.F.J. (author), Duynkerke, Lennard (author), Van Arragon, Jels (author), Van Prooijen, Kevin (author), Van Der Goot, Luuk (author), Bera, B. (author)
As part of the final projects of our introductory lab course, students conceived experiments related to the umbrella topic of 'Physics of toys and sports' and carried out the experiments at their homes. This paper revisits two of these experiments described by student teams and illustrates how self-conceived experiments provide opportunities...
journal article 2021
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Bera, Subhas Chandra (author), Seifert, Mona (author), Kirchdoerfer, Robert N. (author), van Nies, Pauline (author), Wubulikasimu, Yibulayin (author), Quack, Salina (author), Papini, Flávia S. (author), Depken, S.M. (author), Dulin, D. (author)
Coronaviruses have evolved elaborate multisubunit machines to replicate and transcribe their genomes. Central to these machines are the RNA-dependent RNA polymerase subunit (nsp12) and its intimately associated cofactors (nsp7 and nsp8). We use a high-throughput magnetic-tweezers approach to develop a mechanochemical description of this core...
journal article 2021
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Bera, B. (author), Khazal, Rama (author), Schroën, Karin (author)
Emulsion stability in a flow field is an extremely important issue relevant for many daily-life applications such as separation processes, food manufacturing, oil recovery etc. Microfluidic studies can provide micro-scale insight of the emulsion behavior but have primarily focussed on droplet breakup rather than on droplet coalescence. The...
journal article 2021
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Seifert, Mona (author), Bera, Subhas C. (author), van Nies, Pauline (author), Kirchdoerfer, Robert N. (author), Shannon, Ashleigh (author), Le, Thi Tuyet Nhung (author), Meng, Xiangzhi (author), Depken, S.M. (author), Dulin, David (author)
The absence of 'shovel-ready' anti-coronavirus drugs during vaccine development has exceedingly worsened the SARS-CoV-2 pandemic. Furthermore, new vaccine-resistant variants and coronavirus outbreaks may occur in the near future, and we must be ready to face this possibility. However, efficient antiviral drugs are still lacking to this day,...
journal article 2021
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Bera, D. (author), Van Den Adel, Franc (author), Radeljic-Jakic, Nikola (author), Lippe, Boris (author), Soozande, M. (author), Pertijs, M.A.P. (author), Verweij, M.D. (author), Kruizinga, P. (author), Daeichin, V. (author), Vos, H.J. (author), van der Steen, A.F.W. (author), Bosch, Johan G. (author), de Jong, N. (author)
We describe a 3-D multiline parallel beamforming scheme for real-time volumetric ultrasound imaging using a prototype matrix transesophageal echocardiography probe with diagonally diced elements and separated transmit and receive arrays. The elements in the smaller rectangular transmit array are directly wired to the ultrasound system. The...
journal article 2018
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Daeichin, V. (author), Bera, D. (author), Raghunathan, S.B. (author), Shabanimotlagh, M. (author), Chen, Z. (author), Chen, C. (author), Noothout, E.C. (author), Vos, H.J. (author), Pertijs, M.A.P. (author), de Jong, N. (author), Verweij, M.D. (author)
This paper presents the design, fabrication and characterization of a miniature PZT-on-CMOS matrix transducer for real-time pediatric 3-dimensional (3D) transesophageal echocardiography (TEE). This 3D TEE probe consists of a 32 × 32 array of PZT elements integrated on top of an Application Specific Integrated Circuit (ASIC). We propose a...
journal article 2018
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Bera, D. (author), Raghunathan, S.B. (author), Chen, C. (author), Chen, Z. (author), Pertijs, M.A.P. (author), Verweij, M.D. (author), Daeichin, V. (author), Vos, H.J. (author), van der Steen, A.F.W. (author), de Jong, N. (author), Bosch, J.G. (author)
Until now, no matrix transducer has been realized for 3D transesophageal echocardiography (TEE) in pediatric patients. In 3D TEE with a matrix transducer, the biggest challenges are to connect a large number of elements to a standard ultrasound system, and to achieve a high volume rate (>200 Hz). To address these issues, we have recently...
journal article 2018
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Chen, C. (author), Chen, Z. (author), Bera, Deep (author), Noothout, E.C. (author), Chang, Z.Y. (author), Tan, M. (author), Vos, H.J. (author), Bosch, Johan G. (author), Verweij, M.D. (author), de Jong, N. (author), Pertijs, M.A.P. (author)
This paper presents a front-end application-specified integrated circuit (ASIC) integrated with a 2-D PZT matrix transducer that enables in-probe digitization with acceptable power dissipation for the next-generation endoscopic and catheter-based 3-D ultrasound imaging systems. To achieve power-efficient massively parallel analog-to-digital...
journal article 2018
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Fool, F. (author), de Wit, J. (author), Vos, H.J. (author), Bera, D. (author), de Jong, N. (author), Verweij, M.D. (author)
The huge amount of data that needs to be transferred between probe and imaging system becomes a major issue when the data transfer capacity is limited, e.g. in handheld systems, wireless probes and miniaturized probes. The amount of data can be significantly reduced by using two-stage beamforming. The first stage consists of a fixed focus...
conference paper 2018
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Chen, C. (author), Chen, Z. (author), Bera, Deep (author), Raghunathan, S.B. (author), Shabanimotlagh, M. (author), Noothout, E.C. (author), Chang, Z.Y. (author), Ponte, Jacco (author), Prins, Christian (author), Vos, H.J. (author), Bosch, J.G. (author), Verweij, M.D. (author), de Jong, N. (author), Pertijs, M.A.P. (author)
This paper presents a power-and area-efficient front-end application-specific integrated circuit (ASIC) that is directly integrated with an array of 32 × 32 piezoelectric transducer elements to enable next-generation miniature ultrasound probes for real-time 3-D transesophageal echocardiography. The 6.1 × 6.1 mm<sup>2</sup> ASIC, implemented...
journal article 2017
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Shabanimotlagh, M. (author), Raghunathan, S.B. (author), Bera, D. (author), Chen, Z. (author), Chen, C. (author), Daeichin, V. (author), Pertijs, M.A.P. (author), Bosch, J.G. (author), de Jong, N. (author), Verweij, M.D. (author)
Echocardiography is a portable, safe, and low-cost imaging technique for accurate assessment of the heart. In transesophageal echocardiography (TEE) the esophagus is utilized as the imaging window to examine the cardiac anatomy and function. In conventional TEE probes, a one-dimensional (1D) ultrasound array is employed to obtain two-dimensional...
abstract 2017
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