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Castillo, J.M. (author), Arif, M. (author), Starmans, M.P.A. (author), Niessen, W.J. (author), Bangma, C.H. (author), Schoots, Ivo G. (author), Veenland, J.F. (author)
The computer-aided analysis of prostate multiparametric MRI (mpMRI) could improve significant-prostate-cancer (PCa) detection. Various deep-learning-and radiomics-based methods for significant-PCa segmentation or classification have been reported in the literature. To be able to assess the generalizability of the performance of these methods,...
journal article 2022
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Starmans, Martijn P.A. (author), Buisman, Florian E. (author), Renckens, Michel (author), Willemssen, François E.J.A. (author), van der Voort, Sebastian R. (author), Groot Koerkamp, B. (author), Grünhagen, Dirk J. (author), Niessen, W.J. (author), Vermeulen, Peter B. (author)
Histopathological growth patterns (HGPs) are independent prognosticators for colorectal liver metastases (CRLM). Currently, HGPs are determined postoperatively. In this study, we evaluated radiomics for preoperative prediction of HGPs on computed tomography (CT), and its robustness to segmentation and acquisition variations. Patients with...
journal article 2021
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Li, Bo (author), Niessen, W.J. (author), Klein, Stefan (author), de Groot, Marius (author), Ikram, M. Arfan (author), Vernooij, Meike W. (author), Bron, Esther E. (author)
This work presents a single-step deep-learning framework for longitudinal image analysis, coined Segis-Net. To optimally exploit information available in longitudinal data, this method concurrently learns a multi-class segmentation and nonlinear registration. Segmentation and registration are modeled using a convolutional neural network and...
journal article 2021
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Sabidussi, E. R. (author), Klein, S. (author), Caan, M. W.A. (author), Bazrafkan, S. (author), den Dekker, A. J. (author), Sijbers, J. (author), Niessen, W.J. (author), Poot, D.H.J. (author)
In this paper, we propose the use of Recurrent Inference Machines (RIMs) to perform T<sub>1</sub> and T<sub>2</sub> mapping. The RIM is a neural network framework that learns an iterative inference process based on the signal model, similar to conventional statistical methods for quantitative MRI (QMRI), such as the Maximum Likelihood...
journal article 2021
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Castillo, Jose M.T. (author), Arif, Muhammad (author), Niessen, W.J. (author), Schoots, Ivo G. (author), Veenland, J.F. (author)
Significant prostate carcinoma (sPCa) classification based on MRI using radiomics or deep learning approaches has gained much interest, due to the potential application in assisting in clinical decision-making. Objective: To systematically review the literature (i) to determine which algorithms are most frequently used for sPCa classification...
journal article 2020
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Dubost, Florian (author), Adams, Hieab (author), Yilmaz, Pinar (author), Bortsova, Gerda (author), Tulder, Gijs van (author), Ikram, M. Arfan (author), Niessen, W.J. (author), Vernooij, Meike W. (author), Bruijne, Marleen de (author)
Finding automatically multiple lesions in large images is a common problem in medical image analysis. Solving this problem can be challenging if, during optimization, the automated method cannot access information about the location of the lesions nor is given single examples of the lesions. We propose a new weakly supervised detection method...
journal article 2020
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Dubost, Florian (author), Yilmaz, Pinar (author), Adams, Hieab (author), Bortsova, Gerda (author), Ikram, M. Arfan (author), Niessen, W.J. (author), Vernooij, Meike (author), de Bruijne, Marleen (author)
Enlarged perivascular spaces (PVS) are structural brain changes visible in MRI, are common in aging, and are considered a reflection of cerebral small vessel disease. As such, assessing the burden of PVS has promise as a brain imaging marker. Visual and manual scoring of PVS is a tedious and observer-dependent task. Automated methods would...
journal article 2019
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