Low-Cost Smith-Waterman Acceleration

Due to advancing technology, genetic sequencing has become cheaper over the years. This has caused the demand for computational power to grow even faster than Moore's law. To remedy this problem, we analyzed low-cost hardware solutions to parallelize the computational part of the genetic sequencing. We proposed a novel method for calculating the...

Compile time aanalysis for hardware transactional memory architectures

Transactional Memory is a parallel programming paradigm in which tasks are executed, in forms of transactions, concurrently by different resources in a system and resolve conflicts between them at run-time. Conflicts, caused by data dependencies, result in aborts and restarts of transactions, thus, degrading the performance of the system. In...

Evaluation Methodology and Systematic Selection of Microcontrollers for Delfi-n3Xt Nanosatellite