Wetlands are important reservoirs of water, carbon and biodiversity. They are typical landscapes of lowland regions that have high potential for water retention. However, the hydrology of these wetlands in tropical regions is often studied in isolation from the processes taking place at the catchment scale. Our main objective is to study the hydrological dynamics of one of the largest tropical rainforest regions on an island using a combination of satellite remote sensing and novel observations from dedicated field campaigns. This contribution offers a comprehensive analysis of the hydrological dynamics of two neighbouring poorly gauged tropical basins; the Kapuas basin (98g700gkm2) in West Kalimantan and the Mahakam basin (77g100gkm2) in East Kalimantan, Indonesia. Both basins are characterised by vast areas of inland lowlands. Hereby, we put specific emphasis on key hydrological variables and indicators such as discharge and flood extent. The hydroclimatological data described herein were obtained during fieldwork campaigns carried out in the Kapuas over the period 2013-2015 and in the Mahakam over the period 2008-2010. Additionally, we used the Tropical Rainfall Measuring Mission (TRMM) rainfall estimates over the period 1998-2015 to analyse the distribution of rainfall and the influence of El-Niño - Southern Oscillation. Flood occurrence maps were obtained from the analysis of the Phase Array type L-band Synthetic Aperture Radar (PALSAR) images from 2007 to 2010. Drought events were derived from time series of simulated groundwater recharge using time series of TRMM rainfall estimates, potential evapotranspiration estimates and the threshold level approach. The Kapuas and the Mahakam lake regions are vast reservoirs of water of about 1000 and 1500gkm2 that can store as much as 3 and 6.5 billiongm3 of water, respectively. These storage capacity values can be doubled considering the area of flooding under vegetation cover. Discharge time series show that backwater effects are highly influential in the wetland regions, which can be partly explained by inundation dynamics shown by flood occurrence maps obtained from PALSAR images. In contrast to their nature as wetlands, both lowland areas have frequent periods with low soil moisture conditions and low groundwater recharge. The Mahakam wetland area regularly exhibits low groundwater recharge, which may lead to prolonged drought events that can last up to 13 months. It appears that the Mahakam lowland is more vulnerable to hydrological drought, leading to more frequent fire occurrences than in the Kapuas basin.@en

Lowlands are vulnerable to flooding due to their mild topography in often densely populated areas with high social and economic value. Moreover, multiple physical processes coincide in lowland areas, such as those involved in river-sea interactions and in merging rivers at confluences. Simultaneous occurrence of such processes can result in amplifying or attenuating effects on water levels. Our aim is to understand the mechanisms behind simultaneous occurrence of discharge waves in a river and its lowland tributaries. Here, we introduce a new way of analyzing lowland discharge and water level dynamics, by tracing individual flood waves based on dynamic time warping. We take the confluence of the Meuse River (∼ 33000km2) with the joining tributaries of the Dommel and Aa rivers as an example, especially because the January 1995 flood at this confluence was the result of the simultaneous occurrence of discharge peaks in the main stream and the tributaries and because independent observations of water levels and discharge are available for a longer period. The analysis shows that the exact timing of the arrival of discharge peaks is of little relevance because of the long duration of the average discharge wave compared to typical time lags between peaks. The discharge waves last on average 9 days, whereas the lag time between discharge peaks in the main river and the tributaries is typically 3 days. This results in backwaters that can rise up to 1.5 m over a distance of 4 km from the confluence. Thus, local measures to reduce the impact of flooding around the confluence should account for the long duration of flood peaks in the main system.@en