S.A.P. van Rossum | TU Delft Repository

Tuneable Control of Organocatalytic Activity through Host–Guest Chemistry

Journal article (2021) - Guotai Li, Fanny Trausel, Rienk Eelkema, Michelle P. van der Helm, Benjamin Klemm, Tobias G. Brevé, Susan A.P. van Rossum, Muhamad Hartono, Harm H.P.J. Gerlings, Matija Lovrak, Jan H. van Esch

Dynamic regulation of chemical reactivity is important in many complex chemical reaction networks, such as cascade reactions and signal transduction processes. Signal responsive catalysts could play a crucial role in regulating these reaction pathways. Recently, supramolecular encapsulation was reported to regulate the activities of artificial catalysts. We present a host-guest chemistry strategy to modulate the activity of commercially available synthetic organocatalysts. The molecular container cucurbit[7]uril was successfully applied to change the activity of four different organocatalysts and one initiator, enabling up- or down-regulation of the reaction rates of four different classes of chemical reactions. In most cases CB[7] encapsulation results in catalyst inhibition, however in one case catalyst activation by binding to CB[7] was observed. The mechanism behind this unexpected behavior was explored by NMR binding studies and pKa measurements. The catalytic activity can be instantaneously switched during operation, by addition of either supramolecular host or competitive binding molecules, and the reaction rate can be predicted with a kinetic model. Overall, this signal responsive system proves a promising tool to control catalytic activity. ...

A fuel-driven chemical reaction network based on conjugate addition and elimination chemistry

Journal article (2020) - Bowen Fan, Yongjun Men, Susan van Rossum, Guotai Li, Rienk Eelkema

Fuel-driven chemical reaction networks provide an opportunity to develop chemical systems that operate out-ofequilibrium. There remains a need to design and develop new fueldriven chemical reaction networks capable of repeated operation using simple and benign chemistry. Here, we propose a new chemical reaction network for fuel-driven transient formation of covalent bonds,
based on redox-controlled conjugate addition and elimination chemistry. By investigating the separate reactions making up the cycle, we find that the bond formation, breaking and regeneration processes can be realized. At present, substantial side reactivity prevents achieving repeated operation of a full cycle in a single system. If such obstacles would be overcome, this chemical reaction
network could be a valuable addition to the toolbox for out-ofequilibrium
systems chemistry ...

Catalytic control in out-of-equilibrium assembly systems

Doctoral thesis (2019) - Susan van Rossum, Rienk Eelkema, Jan van Esch

Nature is capable of constantly adapting some of its assembled structures in response to external and internal signals. For instance, microtubuli grow and shrink upon cell division and cellular transport. Furthermore, actin fibers play a major role in muscle contraction and cell signaling. To achieve these transient functions, such assembled structures operate in an out-of-equilibrium state. Energy input and dissipation enables structure growth and subsequent collapse. Regulating the energy input with fuel concentration and the activity of associated enzymatically catalyzed processes leads to a high level of kinetic control in biological out-of-equilibrium processes.... ...

Aniline Catalysed Hydrazone Formation Reactions Show a Large Variation in Reaction Rates and Catalytic Effects

Journal article (2018) - Fanny Trausel, Bowen Fan, Susan A.P. van Rossum, Jan H. van Esch, Rienk Eelkema

Hydrazone formation reactions from aldehydes and hydrazides have the remarkable qualities that they proceed in water and the kinetics can be controlled by organocatalysis. For these reasons, this class of reactions finds widespread use in biological as well as material settings. We recently reported a protected aniline catalyst for hydrazone formation that can be activated using a chemical signal. In our search to find a suitable hydrazone formation reaction to investigate the activation of this pro-catalyst, we found a wide variety in reaction rates and response to catalysis. Here we report an overview of hydrazone formation reactions, their reaction rates and response to aniline catalysis, their compatibility for kinetic analysis by UV/Vis spectroscopy, and their compatibility with the reaction environment and with the pro-catalyst pro-aniline. ...

Dissipative out-of-equilibrium assembly of man-made supramolecular materials

Journal article (2017) - Susan van Rossum, Marta Tena-Solsona, Jan van Esch, Job Boekhoven

The use of dissipative self-assembly driven by chemical reaction networks for the creation of unique structures is gaining in popularity. In dissipative self-assembly, precursors are converted into self-assembling building blocks by the conversion of a source of energy, typically a photon or a fuel molecule. The self-assembling building block is intrinsically unstable and spontaneously reverts to its original precursor, thus giving the building block a limited lifetime. As a result, its presence is kinetically controlled, which gives the associated supramolecular material unique properties. For instance, formation and properties of these materials can be controlled over space and time by the kinetics of the coupled reaction network, they are autonomously self-healing and they are highly adaptive to small changes in their environment. By means of an example of a biological dissipative self-assembled material, the unique concepts at the basis of these supramolecular materials will be discussed. We then review recent efforts towards man-made dissipative assembly of structures and how their unique material properties have been characterized. In order to help further the field, we close with loosely defined design rules that are at the basis of the discussed examples. ...