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M.D. Henriques da Silva

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Doctoral thesis (2019) - Marcelo Henriques da Silva
Polyphenols are molecules with a wide range of bioactive properties. They are being applied as nutraceuticals or natural colorants. The growing interest in these molecules has led to the creation of projects such as the BacHBerry project (www. bachberry.eu), with the main goal of discovering novel polyphenols and tapping their commercial application (Chapter 1). Moreover, the same project targets the synthesis of those secondary metabolites by fermentation, in order to increase process yield and decrease the environmental impact. That shift in the current paradigm, based on the recovery of polyphenols by plant extraction requires the development of different downstream process strategies ...
Journal article (2019) - Nicolai Kallscheuer, Regina Menezes, Alexandre Foito, Marcelo Henriques Da Silva, Adelaide Braga, Wijbrand Dekker, David Méndez Sevillano, Rita Rosado-Ramos, Marcel Ottens, More Authors...
Edible berries are considered to be among nature’s treasure chests as they contain a large number of (poly)phenols with potentially health-promoting properties. However, as berries contain complex (poly)phenol mixtures, it is challenging to associate any interesting pharmacological activity with a single compound. Thus, identification of pharmacologically interesting phenols requires systematic analyses of berry extracts. Here, raspberry (Rubus idaeus, var Prestige) extracts were systematically analyzed to identify bioactive compounds against pathological processes of neurodegenerative diseases. Berry extracts were tested on different Saccharomyces cerevisiae strains expressing disease proteins associated with Alzheimer’s, Parkinson’s, or Huntington’s disease, or amyotrophic lateral sclerosis. After identifying bioactivity against Huntington’s disease, the extract was fractionated and the obtained fractions were tested in the yeast model, which revealed that salidroside, a glycosylated phenol, displayed significant bioactivity. Subsequently, a metabolic route to salidroside was reconstructed in S. cerevisiae and Corynebacterium glutamicum. The best-performing S. cerevisiae strain was capable of producing 2.1 mM (640 mg L21) salidroside from Glc in shake flasks, whereas an engineered C. glutamicum strain could efficiently convert the precursor tyrosol to salidroside, accumulating up to 32 mM (9,700 mg L21) salidroside in bioreactor cultivations (yield: 0.81 mol mol21). Targeted yeast assays verified that salidroside produced by both organisms has the same positive effects as salidroside of natural origin. ...
Liquid-liquid extraction (LLE) can be an effective strategy for the purification of polyphenols from a fermentation broth. However, solvents need to be chosen to ensure high extraction capacity and selectivity. For that purpose, a systematic study is here presented, where the partition of different polyphenols - naringin, naringenin, p-coumaric acid, and trans-resveratrol - was measured in different solvents and solvent mixtures and described using the semipredictive NRTL-SAC model. The minimum average absolute deviation obtained, based on predicted activity coefficients, was of 40%. With the exception of naringin, the NRTL-SAC molecular descriptors were estimated using solubility data already available in the literature. The obtained results made it possible to propose suitable LLE-based downstream process schemes for two possible purification scenarios: the recovery of trans-resveratrol and the purification of both naringenin and trans-resveratrol, two similar hydrophobic polyphenols, both from a fermentation broth containing hydrophilic impurities (e.g., sugars, proteins). ...

BACterial Hosts for production of Bioactive phenolics from bERRY fruits

Journal article (2018) - Alexey Dudnik, A. Filipa Almeida, Dario Breitel, Rex Brennan, Laurent Bulteau, Celine Chanforan, Inês Costa, Rafael S. Costa, Mahdi Doostmohammadi, Nuno Faria, Chengyong Feng, Armando Fernandes, Ricardo Andrade, Patricia Ferreira, Roberto Ferro, Alexandre Foito, Sabine Freitag, Gonçalo Garcia, Paula Gaspar, Joana Godinho-Pereira, Björn Hamberger, András Hartmann, Harald Heider, Barbara Avila, Carolina Jardim, Alice Julien-Laferriere, Nicolai Kallscheuer, Wolfgang Kerbe, Oscar P. Kuipers, Shanshan Li, Nicola Love, Alberto Marchetti-Spaccamela, Jan Marienhagen, Cathie Martin, Pilar Bañados, Arnaud Mary, Vincent Mazurek, Camillo Meinhart, David Méndez Sevillano, Regina Menezes, Michael Naesby, Morten H.H. Nørholm, Finn T. Okkels, Joana Oliveira, Marcel Ottens, Diane Barbay, Delphine Parrot, Lei Pei, Isabel Rocha, Rita Rosado-Ramos, Caroline Rousseau, Marie France Sagot, Claudia Nunes Dos Santos, Markus Schmidt, Tatiana Shelenga, Louise Shepherd, Jean Etienne Bassard, Ana Rita Silva, Marcelo Henriques da Silva, Olivier Simon, Steen Gustav Stahlhut, Ana Solopova, Artem Sorokin, Derek Stewart, Leen Stougie, Shang Su, Vera Thole, Mounir Benkoulouche, Olga Tikhonova, Martin Trick, Philippe Vain, André Veríssimo, Ana Vila-Santa, Susana Vinga, Michael Vogt, Liangsheng Wang, Lijin Wang, Wei Wei, Michael Bott, Sandra Youssef, Ana Rute Neves, Jochen Forster, Adelaide Braga
BACterial Hosts for production of Bioactive phenolics from bERRY fruits (BacHBerry) was a 3-year project funded by the Seventh Framework Programme (FP7) of the European Union that ran between November 2013 and October 2016. The overall aim of the project was to establish a sustainable and economically-feasible strategy for the production of novel high-value phenolic compounds isolated from berry fruits using bacterial platforms. The project aimed at covering all stages of the discovery and pre-commercialization process, including berry collection, screening and characterization of their bioactive components, identification and functional characterization of the corresponding biosynthetic pathways, and construction of Gram-positive bacterial cell factories producing phenolic compounds. Further activities included optimization of polyphenol extraction methods from bacterial cultures, scale-up of production by fermentation up to pilot scale, as well as societal and economic analyses of the processes. This review article summarizes some of the key findings obtained throughout the duration of the project. ...