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Journal article (2023) - José M. Rivera-Arbeláez, Danjel Keekstra, Carla Cofiño-Fabres, Tom Boonen, Milica Dostanic, Simone A. ten Den, Kim Vermeul, Massimo Mastrangeli, Albert van den Berg, More Authors...
The high rate of drug withdrawal from the market due to cardiovascular toxicity or lack of efficacy, the economic burden, and extremely long time before a compound reaches the market, have increased the relevance of human in vitro models like human (patient-derived) pluripotent stem cell (hPSC)-derived engineered heart tissues (EHTs) for the evaluation of the efficacy and toxicity of compounds at the early phase in the drug development pipeline. Consequently, the EHT contractile properties are highly relevant parameters for the analysis of cardiotoxicity, disease phenotype, and longitudinal measurements of cardiac function over time. In this study, we developed and validated the software HAARTA (Highly Accurate, Automatic and Robust Tracking Algorithm), which automatically analyzes contractile properties of EHTs by segmenting and tracking brightfield videos, using deep learning and template matching with sub-pixel precision. We demonstrate the robustness, accuracy, and computational efficiency of the software by comparing it to the state-of-the-art method (MUSCLEMOTION), and by testing it with a data set of EHTs from three different hPSC lines. HAARTA will facilitate standardized analysis of contractile properties of EHTs, which will be beneficial for in vitro drug screening and longitudinal measurements of cardiac function. ...
Review (2018) - Yawar Abbas, Farhad Pargar, Dessi A. Koleva, Klaas van Breugel, Wouter Olthuis, Albert van den Berg
In this work, the different techniques for non-destructive in situ measurement of chloride ion concentration are presented. Non-destructive (ND) in situ measurement is crucial for reliable and continuous determination of chloride ion concentration in concrete. Over the last 20 years, several studies have been performed on ND measurements. These were mainly focused on the application of electrochemical and electromagnetic techniques. Each technique has its advantages and disadvantages. Depending on the requirement of assets managers and constructors and considering the limitations, these techniques can be well applied. The main concepts and comparative analysis, in view of possibilities and limitations, of these non-destructive techniques are presented in this paper. ...