Constructions and Properties of Efficient DNA Synthesis Codes

Journal Article (2024)
Author(s)

Kees A. Immink (Turing Machines Inc.)

Kui Cai (Singapore University of Technology and Design)

Tuan Thanh Nguyen (Singapore University of Technology and Design)

J.H. Weber (TU Delft - Discrete Mathematics and Optimization)

Research Group
Discrete Mathematics and Optimization
DOI related publication
https://doi.org/10.1109/TMBMC.2024.3401583
More Info
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Publication Year
2024
Language
English
Research Group
Discrete Mathematics and Optimization
Issue number
2
Volume number
10
Pages (from-to)
289-296
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Abstract

We report on coding methods for efficiently synthesizing deoxyribonucleic acid (DNA) for massive data storage, where a plurality of DNA strands are synthesized in parallel. We examine the trade-offs between the information contents, redundancy, and the average or maximum number of cycles required for synthesizing a plurality of parallel DNA strands. We analyze coding methods such as guided scrambling and constrained codes for minimizing the cycle count.

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