A Real-Time Reconfigurable Multichip Architecture for Large-Scale Biophysically Accurate Neuron Simulation

Journal Article (2018)
Author(s)

A Zjajo (TU Delft - Signal Processing Systems)

J Hofman (Technische Universität Darmstadt)

G.J. Christiaanse (Student TU Delft)

Martijn van Eijk (Student TU Delft)

Georgios Smaragdos (Erasmus MC)

Christos Strydis (Erasmus MC)

C. Galuzzi (BMI Research Group)

Rene Van Leuken (TU Delft - Signal Processing Systems)

Alexander de Graaf (TU Delft - Signal Processing Systems)

Research Group
Signal Processing Systems
DOI related publication
https://doi.org/10.1109/TBCAS.2017.2780287
More Info
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Publication Year
2018
Language
English
Research Group
Signal Processing Systems
Issue number
2
Volume number
12
Pages (from-to)
326-337

Abstract

Simulation of brain neurons in real-time using biophysically meaningful models is a prerequisite for comprehensive understanding of how neurons process information and communicate with each other, in effect efficiently complementing in-vivo experiments. State-of-the-art neuron simulators are, however, capable of simulating at most few tens/hundreds of biophysically accurate neurons in real-time due to the exponential growth in the interneuron communication costs with the number of simulated neurons. In this paper, we propose a real-time, reconfigurable, multichip system architecture based on localized communication, which effectively reduces the communication cost to a linear growth. All parts of the system are generated automatically, based on the neuron connectivity scheme. Experimental results indicate that the proposed system architecture allows the capacity of over 3000 to 19 200 (depending on the connectivity scheme) biophysically accurate neurons over multiple chips.

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