CJ

C.D. JIMENEZ RODRIGUEZ

info

Please Note

16 records found

Storage change in heat in the soil is one of the main components of the energy balance and is essential in studying the land-Atmosphere heat exchange. However, its measurement proves to be difficult due to (vertical) soil heterogeneity and sensors easily disturbing the soil. Improvements in the precision and resolution of distributed temperature sensing (DTS) equipment has resulted in its widespread use in geoscientific studies. Multiple studies have shown the added value of spatially distributed measurements of soil temperature and soil heat flux. However, due to the spatial resolution of DTS measurements (g1/430gcm), soil temperature measurements with DTS have generally been restricted to (horizontal) spatially distributed measurements. This paper presents a device which allows high-resolution measurements of (vertical) soil temperature profiles by making use of a 3D-printed screw-like structure. A 50gcm tall probe is created from segments manufactured with fused-filament 3D printing and has a helical groove to guide and protect a fiber-optic (FO) cable. This configuration increases the effective DTS measurement resolution and will inhibit preferential flow along the probe. The probe was tested in the field, where the results were in agreement with the reference sensors. The high vertical resolution of the DTS-measured soil temperature allowed determination of the thermal diffusivity of the soil at a resolution of 2.5gcm, many times better than what is feasible using discrete probes. A future improvement in the design could be the use of integrated reference temperature probes, which would remove the need for DTS calibration baths. This could, in turn, support making the probes "plug and play"into the shelf instruments without the need to splice cables or experience in DTS setup design. The design can also support the integration of an electrical conductor into the probe and allow heat tracer experiments to derive both the heat capacity and the thermal conductivity over depth at high resolution. ...

Implications for Palo Verde National Park Wetlands, Costa Rica

Journal article (2022) - Julio César Calvo-Alvarado, César Dionisio Jiménez-Rodríguez, Juan Carlos Solano, Oscar Arias-Rodríguez
Seasonal wetlands in the tropics are important habitats for local and migratory bird species. In the northwestern Pacific of Costa Rica, Palo Verde National Park has one of the most important seasonal wetlands of Central America. The management history of this wetland has shown the impact of invasive plant species such as Parkinsonia aculeata L. whose cover extension and canopy structure impact not only the ecological niches of bird species, but also the wetland hydrology. A 300 m2 plot was established in a P. aculeata stand to evaluate the role of P. aculeata on the partitioning and redistribution of precipitation. Gross precipitation (PGr ), throughfall (PTF) and stemflow (PSF) were measured on a daily basis to determine the interception of precipitation (PI ) and net precipitation (PNet ). A total of 43 precipitation events were sampled during the wet season of 2003. We measured 530.5 mm of PGr and 458 mm of PTF, with an average sampling error of 0.7 mm or 6.1%. Canopy storage capacity was estimated at 1.47 mm, throughfall 88.73%, stem flow 2.63% and a total interception of 8.64%, with a PNet coefficient of 0.9475. The relationships between gross precipitation (PGr) with throughfall (PTF), stemflow (PSF) and net precipitation (PNet ) were evaluated using linear regression models. P. aculeata showed to have one of the highest net precipitation and lowest precipitation interception among small trees. ...
Despite the importance of forests in the water and carbon cycles, accurately measuring their contribution remains challenging, especially at night. During clear-sky nights current models and theories fail, as non-turbulent flows and spatial heterogeneity become more important. One of the standing issues is the ‘decoupling’ of the air masses in and above the canopy, where little turbulent exchange takes place, thus preventing proper measurement of atmospheric fluxes. Temperature inversions, where lower air is colder and thus more dense, can be both the cause and result of this decoupling. With Distributed Temperature Sensing (DTS) it is now possible to detect these temperature inversions, and increase our understanding of the decoupling mechanism. With DTS we detected strong inversions within the canopy of a tall Douglas Fir stand. The inversions formed in on clear-sky nights with low turbulence, and preferentially formed in the open understory. A second inversion regularly occurred above the canopy. Oscillations in this upper inversion transferred vertically through the canopy and induced oscillations in the lower inversion. We hypothesize that the inversions could form due to a local suppression of turbulent motions along the height of the canopy. This was supported by a 1-D conceptual model, which showed that a local inversion layer would always form within the canopy if the bulk inversion (over the full canopy) was strong enough. Due to the near-continuous vertical motion and specific height the inversions occur at, a very high measurement density (better than ∼2 m) and measurement frequency (>0.1 Hz) are required to detect them. Consequently, it could be possible that the observed inversions are a regular feature in similarly structured forests, but are generally not directly observed. With DTS it is possible to detect and describe these types of features, which will aid in improving our understanding of atmospheric flows over complex terrain such as forests. ...

Spotting the invisible evaporation

Journal article (2021) - Cesar Dionisio Jiménez-Rodríguez, Miriam Coenders-Gerrits, Bart Schilperoort, Adriana del Pilar González-Angarita, Hubert Savenije
Forest evaporation exports a vast amount of water vapor from land ecosystems into the atmosphere. Meanwhile, evaporation during rain events is neglected or considered of minor importance in dense ecosystems. Air convection moves the water vapor upwards leading to the formation of large invisible vapor plumes, while the identification of visible vapor plumes has not yet been studied. This work describes the formation process of vapor plumes in a tropical wet forest as evidence of evaporation processes happening during rain events. In the dry season of 2018 at La Selva Biological Station (LSBS) in Costa Rica it was possible to spot visible vapor plumes within the forest canopy. The combination of time-lapse videos at the canopy top with conventional meteorological measurements along the canopy profile allowed us to identify the driver conditions required for this process to happen. This phenomenon happened only during rain events. Visible vapor plumes during the daytime occurred when the following three conditions are accomplished: presence of precipitation (P), air convection, and a lifting condensation level value smaller than 100 m at 43 m height (z lcl.43). ...
Journal article (2020) - Jennifer S. Powers, German Vargas G., Timothy J. Brodribb, Naomi B. Schwartz, Daniel Pérez-Aviles, Chris M. Smith-Martin, Justin M. Becknell, Filippo Aureli, César D. Jiménez-Rodríguez, More authors...
Drought-related tree mortality is now a widespread phenomenon predicted to increase in magnitude with climate change. However, the patterns of which species and trees are most vulnerable to drought, and the underlying mechanisms have remained elusive, in part due to the lack of relevant data and difficulty of predicting the location of catastrophic drought years in advance. We used long-term demographic records and extensive databases of functional traits and distribution patterns to understand the responses of 20–53 species to an extreme drought in a seasonally dry tropical forest in Costa Rica, which occurred during the 2015 El Niño Southern Oscillation event. Overall, species-specific mortality rates during the drought ranged from 0% to 34%, and varied little as a function of tree size. By contrast, hydraulic safety margins correlated well with probability of mortality among species, while morphological or leaf economics spectrum traits did not. This firmly suggests hydraulic traits as targets for future research. ...
Tropical wet forests are complex ecosystems with a large number of plant species. These environments are characterized by a high water availability throughout the whole year and a complex canopy structure. However, how the different sections of the canopy contribute to total evaporation is poorly understood. The aim of this work is to estimate the total evaporation flux and differentiate the contribution among canopy layers of a tropical wet forest in Costa Rica. The fluxes were monitored during the dry season by making use of the energy balance to quantify the fluxes and stable water isotopes to trace the sources of water vapor. Total evaporation was 275.5 mm and represents 55.9 % of the recorded precipitation (498.8 mm), with 11.7 % of the precipitation being intercepted and evaporated along the forest canopy. The understory beneath 8 m contributed 23.6 % of the evaporation, and almost half of it comes from the first 2 m of the understory. Stable water isotope signatures show different soil water sources depending on the plant type. Palms make use of a water source with an isotope signature similar to precipitation and throughfall. Soil water with a fractionated signature is used by trees, bushes and lianas. The isotope signature of water vapor samples overlap among different heights, but it was not possible to make use of the Keeling plot method due to the similar isotope signature of the possible sources of water vapor as well as the high water concentration even on the dryer days. ...
Book chapter (2020) - Scott T. Allen, Doug P. Aubrey, Maaike Y. Bader, Miriam Coenders-Gerrits, Jan Friesen, Ethan D. Gutmann, François Guillemette, Cesar Jimenez Rodriguez, Bart Schilperoort, More authors...
The interception of precipitation by vegetation has important consequences for climate and water resources. Although canopy interception has been studied for centuries, many fundamental unknowns remain. We present persistent questions that reflect challenges in measuring, representing, and understanding how terrestrial ecosystems intercept, partition, and transport precipitation—down to soils or back to the atmosphere. In summary of this book, we outline future needs and simultaneously provide a primer for those interested in precipitation interception processes. ...

A look into the subcanopy with continuous vertical temperature profiles

Complex ecosystems such as forests make accurately measuring atmospheric energy and matter fluxes difficult. One of the issues that can arise is that parts of the canopy and overlying atmosphere can be turbulently decoupled from each other, meaning that the vertical exchange of energy and matter is reduced or hampered. This complicates flux measurements performed above the canopy. Wind above the canopy will induce vertical exchange. However, stable thermal stratification, when lower parts of the canopy are colder, will hamper vertical exchange. To study the effect of thermal stratification on decoupling, we analyze highresolution (0.3 m) vertical temperature profiles measured in a Douglas fir stand in the Netherlands using distributed temperature sensing (DTS). The forest has an open understory (0'20 m) and a dense overstory (20'34 m). The understory was often colder than the atmosphere above (80 % of the time during the night, > 99 % during the day). Based on the aerodynamic Richardson number the canopy was regularly decoupled from the atmosphere (50 % of the time at night). In particular, decoupling could occur when both u∗ < 0:4 m s-1 and the canopy was able to cool down through radiative cooling. With these conditions the understory could become strongly stably stratified at night. At higher values of the friction velocity the canopy was always well mixed. While the understory was nearly always stably stratified, convection just above the forest floor was common. However, this convection was limited in its vertical extent, not rising higher than 5 m at night and 15 m during the day. This points towards the understory layer acting as a kind of mechanical "blocking layer"between the forest floor and overstory. With the DTS temperature profiles we were able to study decoupling and stratification of the canopy in more detail and study processes which otherwise might be missed. These types of measurements can aid in describing the canopy' atmosphere interaction at forest sites and help detect and understand the general drivers of decoupling in forests. ...

The role of forest structure

Doctoral thesis (2020) - C.D. Jimenez Rodriguez
Forest evaporation (Ei) is considered the main source of water vapor at a continental scale. Its quantification has been carried out in many ecosystems worldwide, applying the classical partitioning method to differentiate among sources of water vapor. This partitioning differentiates between transpiration (Et), soil evaporation (Es), water intercepted by plant and ground surfaces (Ei), and open water evaporation (Es) in flooded forests and mangroves. The partitioning of evaporation has been carried out by applying different methodologies such as eddy-covariance, conventional micro-meteorological measurements, stable water isotopes, and the combination of some of these methodologies. However, the classical partitioning approach can have large uncertainties in specific forest ecosystems as a consequence of the canopy structure. Instead, including canopy structure into the evaporation partitioning allowed us to better understand this flux. Forest canopy structure is difficult to assess and is determined by latitude, altitude, water availability, and growing stage of the forest. However, using the canopy layering (overstory, understory, ground layer, and forest floor layer) we can assess the contribution from the structural point of view. Forest succession is one factor affecting the classical partitioning in Tropical Deciduous Broadleaf Forest. Using cumulative daily collectors in three different stages of Tropical Dry Forest in Costa Rica, we were able to depict how the increment in forest complexity affects the interception of precipitation. Also, the Plant Area Index was the only structural parameter significantly correlated with the estimates of both, interception and effective precipitation. The capacity of the other parameters (e.g., tree densities, tree heights, number of species) was not enough to describe the effect of a growing forest on the interception of precipitation. Tropical forests with less water stress during the dry season allocate more biomass to their canopies. This increases the forest complexity in terms of the number of species, canopy height, and plant types. Tropical Evergreen Broadleaf forests have a more complex canopy structure than the Deciduous ones. The tropical wet forest in Costa Rica has a canopy of 45 m height and a large number of plant species including trees, lianas, palms, and bushes that provide a completely different canopy structure than mono-specific forests. Here, we were able to define three canopy layers according to canopy height (overstory, lower and upper understory) and monitor the evaporation process during one dry season. Applying conventional micro-meteorological measurements we were able to determine that the lower and upper understory layers contributed 9 % and 15 % of the evaporation, respectively. Meanwhile, the use of water stable isotopes did not allow us to determine the contribution of transpiration using the keeling plot method. However, the signatures of the stable water isotopes allowed us to determine that the source of water used by the plants depends on its type (liana, tree, palm, or bush). Also, we quantified the evaporation during precipitation events as one-third of the amount measured during dry sunny days. The proportion did not change during rain events per canopy layer. This water vapor was produced by the "splash droplet evaporation" process, that together with the energy convection and low air temperature produced the visible vapor plumes. We were able to identify the conditions during which the visible vapor plumes can be spotted. These conditions are the presence of precipitation, air convection, and a lifting condensation level at the top of the canopy with values lower than 100 m. Plants growing in arid environments developed strategies that help them to cope with the scarcity of water. Usually, these plants grow lumped in patches and the introduction of tree species to fight desertification changed the landscape introducing a forest-like land cover. In a Temperate Shurbland in China, we evaluated the effect of Willow trees (Salix matsudana) and Willow bushes (Salix psammophila) on the soil water after summer. Using stable water isotopes we identified the redistribution of groundwater beneath the plants through the hydraulic lift process. Mono-specific forest ecosystems such as the Temperate Evergreen Needleleaf Forest may modify the micro-meteorological conditions beneath their canopies. In Speulderbos, we monitor the evaporation process through eddy-covariance and stable water isotope techniques in a Douglas-Fir (Pseudotsuga menziesii) stand. Also, the evaporation process in the forest floor layer was analyzed in detail under laboratory conditions. Different forest floor layers evaporates up to 1.5 mm d-1, differing from field conditions, where the evaporation from these layers do not exceed the 0.2 mm d-1. This evaporation, represents only the 5.5 % of the total measured during the monitoring period. However, there is no evidence that the forest floor evaporation move upwards to contribute to the total evaporation measured above the overstory. This was confirmed by the eddy-covariance footprint and stable water isotopes signatures of the air measured continuously on the forest. Finally, the partitioning of evaporation based on canopy structure is suitable for complex ecosystems with a large number of species and a multilayered canopy. This leaves the classical partitioning for more homogeneous ecosystems where it can be carried out with a smaller monitoring investment. ...
While evaporation is the largest water consumer of terrestrial water, its importance is often (limitedly) linked to increasing crop productivities. As a consequence, our knowledge of the evaporation process is highly biased by agricultural settings, and results in erroneous estimates of evaporation for other land surfaces and especially for forest systems. The reason why crop and forest systems differ has to do with the vegetation height and what is happening in the space between the plant top and surface. Forests are multi-layered systems, where under the tallest tree species, lower vegetation layers are present. These lower vegetation layers transpire, but at a different rate then the main vegetation, since the atmospheric conditions are different under the canopy. Additionally, the sub-vegetation layers, and also the forest floor, intercept water. Next to different atmospheric conditions per layer, the interception process is highly complex due to differences in interception capacity and a time delay caused by the cascade of water when water flows from the top canopy down to the forest floor. Lastly, forests also have the capacity to store heat and vapor in the air column, biomass, and soil. While this energy storage can be up to 110 W/m2 it is often neglected in evaporation models. To get a better understanding of what is happening inside a forest, for the purpose of evaporation modeling, we should make use of new sensing techniques that allow identifying the rainfall, energy, and evaporation partitioning. This will help to improve evaporation estimates for tall vegetation, like forest, and allow spatial up scaling. ...
Journal article (2019) - Cesar Jimenez Rodriguez, Catalina Esquivel-Vargas, Miriam Coenders-Gerrits, Mahmood Sasa-Marín
The hydrology of tropical seasonal wetlands is affected by changes in the land cover. Changes from open water towards a vegetated cover imply an increase in the total evaporation flux, which includes the evaporation from open water bodies and the transpiration from vegetated surfaces. This study quantified the total evaporation flux of six covers of the Palo Verde wetland during dry season. The selected wetland covers were dominated by Neptunia natans (L.f.) Druce, Thalia geniculata L., Typha dominguensis Pers., Eichhornia crassipes (Mart.) Solms, a mixture of these species, and open water conditions. The plants were collected from the wetland and placed in lysimeters (59.1 L) built from plastic containers. The lysimeters were located in an open area near the meteorological station of the Organization for Tropical Studies (OTS). The evaporated water volume and meteorological data were collected between December 2012–January 2013. A completely randomized design was applied to determine the total evaporation (E), reference evaporation (Eref, Penman-Monteith method) and crop coefficient (Kc) for all the covers. T. geniculata (E: 17.0 mm d−1, Kc: 3.43) and open water (E: 8.2 mm d−1, Kc: 1.65) showed the highest and lowest values respectively, for daily evaporation and crop coefficient. Results from the ANOVA indicate that E. crassipes and N. natans were statistically different (p = 0.05) from T. dominguensis and the species mixture, while the water and T. geniculata showed significant differences with regard to other plant covers. These results indicate that the presence of emergent macrophytes as T. geniculata and T. dominguensis will increase the evaporation flux during dry season more than the floating macrophytes or open water surfaces. ...

The Effect of Afforested Plants in Arid Environments

Journal article (2019) - César Dionisio Jiménez-Rodríguez, Miriam Coenders-Gerrits, Stefan Uhlenbrook, Jochen Wenninger
The implementation of afforestation programs in arid environments in northern China had modified the natural vegetation patterns. This increases the evaporation flux; however, the influence of these new covers on the soil water conditions is poorly understood. This work aims to describe the effect of Willow bushes (Salix psammophila C. Wang and Chang Y. Yang) and Willow trees (Salix matsudana Koidz.) on the soil water conditions after the summer. Two experimental plots located in the Hailiutu catchment (Shaanxi province, northwest China), and covered with plants of each species, were monitored during Autumn in 2010. The monitoring included the soil moisture, fine root distribution and transpiration fluxes that provided information about water availability, access and use by the plants. Meanwhile, the monitoring of stable water isotopes collected from precipitation, soil water, groundwater and xylem water linked the water paths. The presence of Willow trees andWillow bushes reduce the effect of soil evaporation after summer, increasing the soil moisture respect to bare soil conditions. Also, the presence of soil water with stable water isotope signatures close to groundwater reflect the hydraulic lift process. This is an indication of soil water redistribution carried out by both plant species. ...
Journal article (2018) - Julio Cesar Calvo-Alvarado, Cesar Jimenez Rodriguez, Ana Julieta Calvo-Obando, Mário Marcos do Espírito-Santo, Thiago Gonçalves-Silva
Tropical dry forests (TDF) are endangered ecosystems characterized by a matrix of successional forest patches with structural differences across the Neotropics. Until now, there have been few studies that analyze the partitioning of rainfall by forest interception in TDF. To contribute to the understanding of the TDF impact on the hydrological dynamic at the ecosystem and landscape levels, a rainfall interception study was conducted in Santa Rosa National Park in Costa Rica (SRNP) and in Mata Seca State Park in Brazil (MSSP). In each site, three plots per successional stage were studied. The successional stages were early, intermediate, and late. In each plot the rainfall, throughfall, and stemflow were monitored during one rainy season. The relationship between gross rainfall and water fluxes was evaluated using linear regression models. In general, net rainfall oscillated from 79.3% to 85.4% of gross rainfall in all the plots in MSSP without any trend related to forest succession, due to the effect of a high density of lianas in the intermediate and late stage plots. In SRNP, there was a clear trend of net rainfall among successional stages: 87.5% (early), 73.0% (intermediate), and 63.4% (late). Net rainfall correlated negatively only with plant area index in SRNP (r = −0.755, p < 0.05). This study highlights the need to study rainfall interception in successional stages to estimate net rainfall that reaches the soil. This would provide better hydrological information to understand water balance and water fluxes at the level of forest ecosystems and landscapes. ...
Rapid improvements in the precision and spatial resolution of Distributed Temperature Sensing (DTS) technology now allows its use in hydrological and atmospheric sciences. Introduced by Euser [Hydrol. Earth Syst. Sci., 18, 2021–2032 (2014)] is the use of DTS for measuring the Bowen ratio (BR-DTS), to estimate the sensible and latent heat flux. The Bowen ratio is derived from DTS measured vertical profiles of the air temperature and wet-bulb temperature. However, in previous research the measured temperatures were not validated, and the cables were not shielded from solar radiation. Additionally, the BR-DTS method has not been tested above a forest before, where temperature gradients are small and energy storage in the air column becomes important. In this paper the accuracy of the wet-bulb and air temperature measurements of the DTS are verified, and the resulting Bowen ratio and heat fluxes are compared to eddy covariance data. The performance of BR-DTS was tested on a 46 m high tower in a mixed forest in the centre of the Netherlands in August 2016. The average tree height is 26 to 30 m, and the temperatures are measured below, in, and above the canopy. Using the vertical temperature profiles the storage of latent and sensible heat in the air column was calculated. We found a significant effect of solar radiation on the temperature measurements, leading to a deviation of up to 3 K. By installing screens, the error caused by sunlight is reduced to under 1 K. Wind speed seems to have a minimal effect on the measured wet-bulb temperature, both below and above the canopy. After a simple quality control, the Bowen ratio measured by DTS correlates well with eddy covariance (EC) estimates (r2 = 0.59). The average energy balance closure between BR-DTS and EC is good, with a mean underestimation of 3.4 W m−2 by the BR-DTS method. However, during daytime the BR-DTS method overestimates the available energy, and during night-time the BR-DTS method estimates the available energy to be more negative. This difference could be related to the biomass heat storage, which is neglected in this study. The BR-DTS method overestimates the latent heat flux on average by 18.7 W m−2, with RMSE = 90 W m−2. The sensible heat flux is underestimated on average by 10.6 W m−2, with RMSE = 76 W m−2. Estimates of the BR-DTS can be improved once the uncertainties in the energy balance are reduced. However, applying e.g. Monin-Obukhov similarity theory could provide independent estimates for the sensible heat flux. This would make the determination of the highly uncertain and difficult to determine net available energy redundant. ...
Abstract (2017) - Cesar Jimenez Rodriguez, Maria Warter, Miriam Coenders-Gerrits
Within a forest ecosystem the litter layer is an important hydrological component and contributes towards the water and energy exchange between the sub-canopy and the soil. Evaporation within a forest is made up of different fractions coming from the dry soil, vegetation and litter layers. The quantification and partitioning of each fraction remains difficult as there is hard to estimate correctly the amount of water moved by evaporation or percolation at ecosystem level. With the aim to determine the influence of forest understory on the evaporation fluxes, four ground cover types were selected from the Speulderbos forest in the Netherlands. The mosses species of “Thamariskmoss” (Thuidium thamariscinum), “Rough Stalked Feathermoss” (Brachythecium rutabulum), and “Haircapmoss” (Polytrichum commune) were compared with a litter layer made up of Douglas-Fir needles (Pseudotsuga menziesii). Four PVC basins with 40cm x 60cm were filled with forest soil and sheltered with the selected ground covers. Each box was equipped with a soil moisture sensor, and a set Temperature and Relative Humidity sensors to determine the VPD during the study period. The study period lasts 4 weeks, while the percolation rates were measured in a daily basis. The rainfall events were simulated in the lab, applying the same rain event to each box at the same time. A total amount of 43.12 mm of rain were added to the boxes during the 4 weeks of the experiment, and distributed in 11 rain events which differ in amount and timing between events. The percolation in all the boxes was more than the 50% of the rain events due to the sandy condition of the soil, while the evaporation rates were affected not only by the room atmospheric conditions, but for the cover type present in each box. Except for the Polytrichum moss, a moss known for its water conducting abilities, all cover types showed a decline before and increase after a rain event. This species showed a steady increase in soil water content over the sampling period due to keeping the water longer in the surface. The evaporation was driven partly by the temperature in the room, while the structural characteristics of the mosses allow the differences in evaporation rates showed along the study period. ...