H.M. Polat
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11 records found
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In this thesis, we investigated how force field-based molecular simulations can be used to compute reaction equilibria and transport properties, relevant for absorption-based CO2 and H2S removal. We introduced novel features to the Brick-CFCMC code and developed a versatile chemical reaction equilibria solver, called CASpy, to compute the concentration of species in any reactive liquid-phase absorption system, including CO2 and H2S absorption in aqueous alkanolamine solutions. We also investigated transport properties of CO2 and H2S in aqueous solutions of two commonly used alkanolamines, MEA and MDEA.
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In this thesis, we investigated how force field-based molecular simulations can be used to compute reaction equilibria and transport properties, relevant for absorption-based CO2 and H2S removal. We introduced novel features to the Brick-CFCMC code and developed a versatile chemical reaction equilibria solver, called CASpy, to compute the concentration of species in any reactive liquid-phase absorption system, including CO2 and H2S absorption in aqueous alkanolamine solutions. We also investigated transport properties of CO2 and H2S in aqueous solutions of two commonly used alkanolamines, MEA and MDEA.
We explore the impact of force field parameters and reaction equilibrium on the scaling behavior towards the critical point in reactive binary systems, focusing on NO 2/N 2O 4. This system can be considered as a special single-component system since NO 2 and N 2O 4 are in chemical equilibrium via the chemical reaction 2NO 2⇌N 2O 4. We simplify the system by representing both components as single LJ particles, achieving excellent agreement with densities computed using molecular simulations in which all-atom force fields were used. We investigate the effect of force field parameters (ɛ and σ) on phase behavior and show that the critical exponent β remains constant, which means that intermolecular interactions do not affect the scaling to the critical point when the chemical reaction takes place. We also investigate the sensitivity of the reaction equilibrium constant and show that even small changes in isolated molecule partition functions lead to large differences in chemical equilibria. We show that the critical exponent β is different for systems with different reaction equilibrium constants, so a careful parameterization of β is needed for an accurate computation of critical temperatures of reactive mixtures. We perform a screening of reactive binary mixtures for a wide range of ideal gas reaction equilibrium constants, revealing key insights into the thermodynamic behavior and critical properties. Thereby we facilitate the efficient screening of reactive binary mixtures for various applications. Our results emphasize the importance of accurately parameterizing β and provide valuable insights into the critical scaling behavior of complex reactive systems.
The use of reactive working fluids in thermodynamic cycles is currently being considered as an alternative to inert working fluids, because of the preliminarily attested higher energy-efficiency potential. The current needs to simulate their use in thermodynamic cycles, which may operate in liquid, vapour or vapour-liquid state, are an accurate real-fluid equation of state and ideal gas thermochemical properties of each molecule constituting the mixture, to calculate the equilibrium constant. To this end, the appeal to a multi-scale theoretical methodology is paramount and its definition represents the objective of the present work. This methodology is applied and validated on the system N2O4 ⇌ 2NO2. Firstly, the equations solved for simultaneous two-phase and reaction equilibrium are presented. Secondly, ideal gas thermochemical properties of N2O4 and NO2 are computed at atomic scale by quantum mechanics simulations. Then, to apply the selected cubic equation of state, pure-component properties of the species forming the reactive mixture (critical point coordinates and acentric factor) are required as input. However, these properties are not measurable, since NO2 and N2O4 do not exist in nature as pure components. To get around this difficulty, the methodology relies on molecular Monte Carlo simulations of the pure N2O4 and NO2, as well as on the reactive N2O4 ⇌ 2NO2, enabling the determination of those missing pure-component properties and thus the calculation, on a macroscopic scale, of the reactive mixture properties. Finally, the comparison of calculated mixture properties with available experimental data leads to validate the accuracy of the proposed methodology.
Diffusivity of CO2 in H2O
A Review of Experimental Studies and Molecular Simulations in the Bulk and in Confinement
An in-depth review of the available experimental and molecular simulation studies of CO2 diffusion in H2O, which is a central property in important industrial and environmental processes, such as carbon capture and storage, enhanced oil recovery, and in the food industry is presented. The cases of both bulk and confined systems are covered. The experimental and molecular simulation data gathered are analyzed, and simple and computationally efficient correlations are devised. These correlations are applicable to conditions from 273 K and 0.1 MPa up to 473 K and 45 MPa. The available experimental data for diffusion coefficients of CO2 in brines are also collected, and their dependency on temperature, pressure, and salinity is examined in detail. Other engineering models and correlations reported in literature are also presented. The review of the simulation studies focuses on the force field combinations, the data for diffusivities at low and high pressures, finite-size effects, and the correlations developed based on the Molecular Dynamics data. Regarding the confined systems, we review the main methods to measure and compute the diffusivity of confined CO2 and discuss the main natural and artificial confining media (i.e., smectites, calcites, silica, MOFs, and carbon materials). Detailed discussion is provided regarding the driving force for diffusion of CO2 and H2O under confinement, and on the role of effects such as H2O adsorption on hydrophilic confining media on the diffusivity of CO2. Finally, an outlook of future research paths for advancing the field of CO2 diffusivity in H2O at the bulk phase and in confinement is laid out.
Densities, viscosities, and diffusivities of loaded and unloaded aqueous CO2/H2S/MDEA mixtures
A molecular dynamics simulation study
Experimentally measuring the diffusivities of CO2 and H2S in aqueous alkanolamine solutions presents an extremely challenging task. To overcome this challenge, we performed Molecular Dynamics (MD) simulations to study the effects of temperature and N-methyldiethanolamine (MDEA) concentration on self-diffusivities of CO2 (DCO2) and H2S (DH2S) in aqueous MDEA solutions. We compute the densities and viscosities of aqueous MDEA solutions for an MDEA concentration range of 10–50 wt% and a temperature range of 288–333 K showing an excellent agreement with experimental data from literature. We compute the self-diffusivity of MDEA (DMDEA) in aqueous MDEA solutions and our findings show that the computed values of DMDEA are in excellent agreement with experimental and simulation results from literature. The self-diffusivities DCO2 and DH2S in aqueous MDEA solutions are computed for a wide range of temperatures and MDEA concentrations and our results show that both DCO2 and DH2S depend significantly on temperature and MDEA concentration. We also show that both CO2 and H2S diffuse slower in aqueous MDEA solutions than in aqueous MEA solutions. By comparing the radial distribution functions of CO2, H2S, water, and MDEA, we show that H2S has stronger interactions with the surrounding molecules than CO2, which makes H2S diffuse slower in aqueous MDEA solutions. We also investigate the densities and viscosities of acid gas loaded aqueous MDEA solutions and self-diffusivities of the reaction products of CO2 and H2S with aqueous MDEA solutions. We show that the self-diffusivities of CO2-loaded solutions significantly decrease with increasing CO2 loading while the self-diffusivities of H2S-loaded solutions do not change with changing H2S loading. Our results will be helpful in the design and optimization of acid gas removal units.
Transport properties of mixtures of acid gases with aqueous monoethanolamine solutions
A molecular dynamics study
We investigated the effect of temperature and monoethanolamine (MEA) concentration on the self-diffusivity of acid gases, CO2, and H2S in aqueous MEA solutions. For this purpose, we computed densities of pure MEA and 30 wt% MEA/water solutions while scaling the LJ energy (ϵ) parameter and point charges of MEA. Results show that with a scaling factor of 0.80 applied to the point charges of MEA, computed densities agree well with the experimental ones from literature. This was tested by computing viscosities and the self-diffusivity of pure MEA and 30 wt% MEA/water solutions and comparing these with experiments. We showed that the scaling factor of 0.80 also works well for predicting transport properties of MEA/water solutions. Finally, we computed self-diffusivities of infinitely diluted CO2 and H2S for temperatures ranging from 293–353 K and MEA concentrations of 10–50 wt%. Our results show that the self-diffusivity of both acid gases depends significantly on the temperature and MEA concentration in the solution. The results of this study will contribute to the development of more efficient acid gas treatment processes.
Solving Chemical Absorption Equilibria using Free Energy and Quantum Chemistry Calculations
Methodology, Limitations, and New Open-Source Software
We developed an open-source chemical reaction equilibrium solver in Python (CASpy, https://github.com/omoultosEthTuDelft/CASpy) to compute the concentration of species in any reactive liquid-phase absorption system. We derived an expression for a mole fraction-based equilibrium constant as a function of excess chemical potential, standard ideal gas chemical potential, temperature, and volume. As a case study, we computed the CO2 absorption isotherm and speciation in a 23 wt % N-methyldiethanolamine (MDEA)/water solution at 313.15 K, and compared the results with available data from the literature. The results show that the computed CO2 isotherms and speciations are in excellent agreement with experimental data, demonstrating the accuracy and the precision of our solver. The binary absorptions of CO2 and H2S in 50 wt % MDEA/water solutions at 323.15 K were computed and compared with available data from the literature. The computed CO2 isotherms showed good agreement with other modeling studies from the literature while the computed H2S isotherms did not agree well with experimental data. The experimental equilibrium constants used as an input were not adjusted for H2S/CO2/MDEA/water systems and need to be adjusted for this system. Using free energy calculations with two different force fields (GAFF and OPLS-AA) and quantum chemistry calculations, we computed the equilibrium constant (K) of the protonated MDEA dissociation reaction. Despite the good agreement of the OPLS-AA force field (ln[K] = −24.91) with the experiments (ln[K] = −23.04), the computed CO2 pressures were significantly underestimated. We systematically investigated the limitations of computing CO2 absorption isotherms using free energy and quantum chemistry calculations and showed that the computed values of μiex are very sensitive to the point charges used in the simulations, which limits the predictive power of this method.
Solubility of CO2in Aqueous Formic Acid Solutions and the Effect of NaCl Addition
A Molecular Simulation Study
There is a growing interest in the development of routes to produce formic acid from CO2, such as the electrochemical reduction of CO2 to formic acid. The solubility of CO2 in the electrolyte influences the production rate of formic acid. Here, the dependence of the CO2 solubility in aqueous HCOOH solutions with electrolytes on the composition and the NaCl concentration was studied by Continuous Fractional Component Monte Carlo simulations at 298.15 K and 1 bar. The chemical potentials of CO2, H2O, and HCOOH were obtained directly from single simulations, enabling the calculation of Henry coefficients and subsequently considering salting in or salting out effects. As the force fields for HCOOH and H2O may not be compatible due to the presence of strong hydrogen bonds, the Gibbs-Duhem integration test was used to test this compatibility. The combination of the OPLS/AA force field with a new set of parameters, in combination with the SPC/E force field for water, was selected. It was found that the solubility of CO2 decreases with increasing NaCl concentration in the solution and increases with the increase of HCOOH concentration. This continues up to a certain concentration of HCOOH in the solution, after which the CO2 solubility is high and the NaCl concentration has no significant effect.
Despite the widespread acknowledgment that deep eutectic solvents (DESs) have negligible vapor pressures, very few studies in which the vapor pressures of these solvents are measured or computed are available. Similarly, the vapor phase composition is known for only a few DESs. In this study, for the first time, the vapor pressures and vapor phase compositions of choline chloride urea (ChClU) and choline chloride ethylene glycol (ChClEg) DESs are computed using Monte Carlo simulations. The partial pressures of the DES components were obtained from liquid and vapor phase excess Gibbs energies, computed using thermodynamic integration. The enthalpies of vaporization were computed from the obtained vapor pressures, and the results were in reasonable agreement with the few available experimental data in the literature. It was found that the vapor phases of both DESs were dominated by the most volatile component (hydrogen bond donor, HBD, i.e., urea or ethylene glycol), i.e., 100% HBD in ChClEg and 88%-93% HBD in ChClU. Higher vapor pressures were observed for ChClEg compared to ChClU due to the higher volatility of ethylene glycol compared to urea. The influence of the liquid composition of the DESs on the computed properties was studied by considering different mole fractions (i.e., 0.6, 0.67, and 0.75) of the HBD. Except for the partial pressure of ethylene glycol in ChClEg, all the computed partial pressures and enthalpies of vaporization showed insensitivity toward the liquid composition. The activity coefficient of ethylene glycol in ChClEg was computed at different liquid phase mole fractions, showing negative deviations from Raoult’s law.
New Features of the Open Source Monte Carlo Software Brick-CFCMC
Thermodynamic Integration and Hybrid Trial Moves
We present several new major features added to the Monte Carlo (MC) simulation code Brick-CFCMC for phase- and reaction equilibria calculations (https://gitlab.com/ETh_TU_Delft/Brick-CFCMC). The first one is thermodynamic integration for the computation of excess chemical potentials (μex). For this purpose, we implemented the computation of the ensemble average of the derivative of the potential energy with respect to the scaling factor for intermolecular interactions (⟨∂U∂λ⟩). Efficient bookkeeping is implemented so that the quantity ∂U∂λ is updated after every MC trial move with negligible computational cost. We demonstrate the accuracy and reliability of the calculation of μex for sodium chloride in water. Second, we implemented hybrid MC/MD translation and rotation trial moves to increase the efficiency of sampling of the configuration space. In these trial moves, short Molecular Dynamics (MD) trajectories are performed to collectively displace or rotate all molecules in the system. These trajectories are accepted or rejected based on the total energy drift. The efficiency of these trial moves can be tuned by changing the time step and the trajectory length. The new trial moves are demonstrated using MC simulations of a viscous fluid (deep eutectic solvent).