Grotthuss transfer is responsible for a large increase in the self-diffusion of hydroxide and hydronium ions in aqueous solutions compared to similarly sized ions. Recent advances in machine-learning molecular dynamics have shown some success in capturing this process. In the present work, we show that classical molecular dynamics combined with experimentally measured electrical conductivities can also be used to determine self-diffusion coefficients and the lifetimes of hydroxide and hydronium ions in aqueous KOH, NaOH, and HCl solutions. This was tested and validated across a wide range of concentrations at 25 and 60 °C. The approach relies on augmenting classically computed trajectories with a biased random walk, which together accounts for both vehicular transport and Grotthuss transfer. The concentration and temperature dependence of this random walk are calibrated by comparing simulated electrical conductivities with available experimental electrical conductivity data. The computed self-diffusion coefficients match measurements at infinite dilution and results from machine learning molecular dynamics. Ion lifetimes reported by machine learning and ab initio molecular dynamics studies depend strongly on the precise definition of what constitutes a Grotthuss transfer event. Our approach for calculating ion lifetimes does not have this drawback. We also show that our self-diffusion coefficients and electrical conductivities are insensitive to the precise definition of what constitutes a Grotthuss transfer event.

Hydrogen can play a central role in a fossil-free energy economy, yet its implementation is hindered by the lack of safe, dense, and efficient storage methods. Hybrid H₂ physisorption-hydrate formation, which combines physisorption in porous materials with encapsulation in clathrate hydrates, presents a promising route, but the fundamental synergistic mechanisms remain largely elusive. Here, we perform microsecond-scale molecular dynamics simulations to study the hybrid H₂ storage process in the hydrophobic metal–organic framework ZIF-8 seeded with THF hydrate nanoparticles. The results indicate that ZIF-8 rapidly physisorbs H₂, while effectively excluding H₂O and THF. Our simulations reveal a dynamic, three-step hybrid storage pathway, i.e. , (1) ZIF-8 selectively adsorbs and enriches H₂ within its pores, creating a high local H₂ concentration; (2) The growing binary H₂-THF hydrate crystals selectively capture the H₂; (3) Transfer of H₂ from the ZIF-8 to the hydrate until the hydrogen source transfer reaches a dynamic equilibrium. This hybrid storage method results in a total H₂ storage capacity reaching 1.82 wt%, exceeding the storage capacity of either physisorption or THF-driven hydrate formation alone. These findings provide critical molecular-level insights, showing that coupling hydrophobic ZIF-8 with hydrate promoters is a highly effective strategy for developing next-generation H₂ storage methods.

Editorial

Hydrate-based H2 storage is based on the mechanism of trapping H2 in water-based structures that are environmentally friendly and cost-efficient. Understanding the effects of common promoters on hydrate-based H2 storage at the molecular level is crucial for designing efficient storage systems, and for discovering novel promoters. Here, a series of μs-scale molecular dynamics simulations are performed to investigate the nucleation of binary H2 hydrates from gas-liquid two-phase solutions in the presence of various promoters, i.e., CH4, CO2, C2H6, C3H8, C5H10, and THF. The simulation results indicate that the H2 and promoter molecules first dissolve in water from the gas phase and then are absorbed on the cage-faces, promoting the nucleation and growth of binary H2 hydrates. THF is the most effective promoter for hydrate-based H2 storage, exhibiting high performance in converting H2 from the gas phase to hydrates. It is followed by CH4, C2H6, and CO2; C3H8 and C5H10 molecules are less effective H2 hydrate promoters. The presence of large promoter molecules enhances multi-occupied cage formation. The molecular insight into the nucleation of binary H2 hydrates with various promoters provided here not only contributes to a broader understanding of hydrate-based H2 storage but is expected to motivate further experimental and computational studies.

This extensive review highlights the central role of classical molecular simulation in advancing hydrogen (H2) technologies. As the transition to a sustainable energy landscape is urgently needed, the optimization of H2 processes, spanning production, purification, transportation, storage, safety, and utilization is essential. To this end, accurate prediction of thermodynamic, transport, structural, and interfacial properties is important for overcoming engineering challenges across the entire H2 value chain. Experimental measurements, despite being the traditional way of obtaining these properties, can be limited by the distinctive nature of H2, harsh operating conditions, safety constraints, and extensive parameter spaces. Free from such limitations, classical molecular simulations, in the general frameworks of Monte Carlo and Molecular Dynamics, provide an optimal balance between computational efficiency and accuracy, bridging the gap between quantum mechanical calculations and macro-scale modeling. This review also systematically covers molecular simulation methods and force fields for computing key properties of H2 systems, such as phase and adsorption equilibria and transport coefficients. Beyond property prediction, we explore how molecular simulation reveals fundamental mechanisms governing hydrate formation and dissociation, membrane permeations, and H2 embrittlement. When possible, data from multiple sources are compared and critically assessed, while effort is put on evaluating the force fields used and methodological approaches followed in the literature. Finally, this review aims at identifying research gaps and future opportunities, emphasizing emerging approaches, such as molecular simulation in the era of artificial intelligence.

Finite-size effects of transport properties computed from molecular dynamics simulations are investigated for Weeks-Chandler-Andersen systems at reduced densities of 0.05 (dilute gas), 0.45 (dense gas), and 0.85 (fluid close to the solid-liquid transition). Viscosities, self-diffusivities, Onsager coefficients, and electrical conductivities are computed for various system sizes ranging from 64 to 8192 WCA particles at each density. At dilute and intermediate densities, finite-size corrections to the transport properties significantly deviate from the widely used Yeh–Hummer correction, which was originally developed for the liquid phase.

One of the most promising energy carriers for transport applications are hydrogen-based energy carriers. NaBH₄ is a hydrogen energy carrier and produces hydrogen bubbles when it is dissolved in water. The formation of hydrogen bubbles hinders experimental measurements of the thermodynamic and transport properties of aqueous NaBH₄ solutions at elevated temperatures. Accurate knowledge of these properties is essential for the NaBH₄ hydrolysis reactor modeling and design. Molecular dynamics (MD) simulations provide the option to study the thermodynamic and transport properties of NaBH₄ aqueous solutions without hindering hydrogen bubble formation. In this work, a new force field is developed for BH₄^-, namely, the Delft force field of BH₄^- (DFF/BH₄^-), which, combined with additional force fields, can accurately describe experimental densities and viscosities of 0 to 5 m (mol salt/kg water) NaBH₄, 0 to 3 m NaB(OH)₄, and 1 m NaOH aqueous solutions at 295 K within 1.8% and 10.8% maximum deviation, respectively. Empirical fitting correlations are created for densities, viscosities, and self-diffusivities obtained from the MD simulations of 0 to 5 m NaBH₄, 0 to 5 m NaB(OH)₄, and 0 to 1 m NaOH aqueous solutions at 295-363 K for NaBH₄ hydrolysis reactor modeling and design purposes.

Accurate conductivity predictions of KOH(aq) are crucial for electrolysis applications. OH– is transferred in water by the Grotthuss transfer mechanism, thereby increasing its mobility compared to that of other ions. Classical and ab initio molecular dynamics struggle to capture this enhanced mobility due to limitations in computational costs or in capturing chemical reactions. Most studies to date have provided only qualitative descriptions of the structure during Grotthuss transfer, without quantitative results for the transfer rate and the resulting transport properties. Here, machine learning molecular dynamics is used to investigate 50,000 transfer events. Analysis confirmed earlier works that Grotthuss transfer requires a reduction in accepted and a slight increase in donated hydrogen bonds to the hydroxide, indicating that hydrogen-bond rearrangements are rate-limiting. The computed self-diffusion coefficients and electrical conductivities are consistent with experiments for a wide temperature range, outperforming classical interatomic force fields and earlier AIMD simulations.

An in-depth review of the available experimental and molecular simulation studies of CO₂ diffusion in H₂O, which is a central property in important industrial and environmental processes, such as carbon capture and storage, enhanced oil recovery, and in the food industry is presented. The cases of both bulk and confined systems are covered. The experimental and molecular simulation data gathered are analyzed, and simple and computationally efficient correlations are devised. These correlations are applicable to conditions from 273 K and 0.1 MPa up to 473 K and 45 MPa. The available experimental data for diffusion coefficients of CO₂ in brines are also collected, and their dependency on temperature, pressure, and salinity is examined in detail. Other engineering models and correlations reported in literature are also presented. The review of the simulation studies focuses on the force field combinations, the data for diffusivities at low and high pressures, finite-size effects, and the correlations developed based on the Molecular Dynamics data. Regarding the confined systems, we review the main methods to measure and compute the diffusivity of confined CO₂ and discuss the main natural and artificial confining media (i.e., smectites, calcites, silica, MOFs, and carbon materials). Detailed discussion is provided regarding the driving force for diffusion of CO₂ and H₂O under confinement, and on the role of effects such as H₂O adsorption on hydrophilic confining media on the diffusivity of CO₂. Finally, an outlook of future research paths for advancing the field of CO₂ diffusivity in H₂O at the bulk phase and in confinement is laid out.

Knowledge on the kinetics of gas hydrate dissociation in clay pores at static and dynamic fluid conditions is a fundamental scientific issue for improving gas production efficiency from hydrate deposits using thermal stimulation and depressurization respectively. Here, molecular dynamics simulations were used to investigate poly- and mono-crystalline methane hydrates in Na-montmorillonite clay nanopores. Simulation results show that hydrate dissociation is highly sensitive to temperature and pressure gradients, but their effects differ. Temperature changes increase thermal instability of water and gas molecules, leading to layer-by-layer dissociation from the outer surface. Under flow conditions, laminar flow predominates in nano-pores, and non-Darcy flow occurs due to clay-fluid interactions. Viscous flow disrupts hydrogen bonding at the hydrate surface, enhancing kinetic instability of water. Grain boundaries of polycrystalline hydrates are less stable compared to bulk phases and preferentially decompose, forming new dissociation fronts. This accelerates dissociation compared to monocrystalline hydrates. Fracture occurs at the grain boundaries of polycrystalline hydrate in the fluid, resulting in separate hydrate crystal grains. This fracture process further accelerates hydrate dissociation. In flow systems, methane nanobubbles form in fluid and readily transport with fluid flow. Unlike surface nanobubbles at static conditions, these liquid nanobubbles exhibit mobility. The findings of this study can contribute to a better understanding of the complex phase transition behavior of hydrate in confined environment, and provide theoretical support for improving production control technology.

Hydrogen is a clean-burning fuel that can be converted to other forms. of energy without generating any greenhouse gases. Currently, hydrogen is stored either by compression to high pressure (>700 bar) or cryogenic cooling to liquid form (<23 K). Therefore, it is essential to develop safe, reliable, and energy-efficient storage technology that can store hydrogen at lower pressures and temperatures. In this work, we systematically designed 2902 Mg-alkoxide-functionalized covalent-organic frameworks (COFs) and performed high-throughput (HT) computational screening for hydrogen storage applications at 111, 231, and 296 K. To accurately model the interaction between Mg-alkoxide sites and molecular hydrogen, we performed MP2 calculations to compute the hydrogen binding energy for different types of functionalized models, and the data were subsequently used to fit modified-Morse force field (FF) parameters. Using the developed FF models, we conducted HT grand canonical Monte Carlo (GCMC) simulations to compute hydrogen uptakes for both original and functionalized COFs. The generated data were subsequently used to evaluate the materials’ gravimetric and volumetric storage performance at various temperatures (111, 231, and 296 K). Finally, we developed machine learning (ML) models to predict the hydrogen storage performance of functionalized structures based on the features of the original structures. The developed model showed excellent performance with a mean absolute error (MAE) of 0.061 wt % and 0.456 g/L for predicting the gravimetric and volumetric deliverable capacities, enabling a quick evaluation of structures in a hypothetical COF database. The screening results demonstrated that the Mg-alkoxide functionalization yields greater improvements in volumetric H2 storage capacities for COFs with smaller pores compared to those with larger (mesoporous) pores.

The use of reactive working fluids in thermodynamic cycles is currently being considered as an alternative to inert working fluids, because of the preliminarily attested higher energy-efficiency potential. The current needs to simulate their use in thermodynamic cycles, which may operate in liquid, vapour or vapour-liquid state, are an accurate real-fluid equation of state and ideal gas thermochemical properties of each molecule constituting the mixture, to calculate the equilibrium constant. To this end, the appeal to a multi-scale theoretical methodology is paramount and its definition represents the objective of the present work. This methodology is applied and validated on the system N₂O₄ ⇌ 2NO₂. Firstly, the equations solved for simultaneous two-phase and reaction equilibrium are presented. Secondly, ideal gas thermochemical properties of N₂O₄ and NO₂ are computed at atomic scale by quantum mechanics simulations. Then, to apply the selected cubic equation of state, pure-component properties of the species forming the reactive mixture (critical point coordinates and acentric factor) are required as input. However, these properties are not measurable, since NO₂ and N₂O₄ do not exist in nature as pure components. To get around this difficulty, the methodology relies on molecular Monte Carlo simulations of the pure N₂O₄ and NO₂, as well as on the reactive N₂O₄ ⇌ 2NO₂, enabling the determination of those missing pure-component properties and thus the calculation, on a macroscopic scale, of the reactive mixture properties. Finally, the comparison of calculated mixture properties with available experimental data leads to validate the accuracy of the proposed methodology.

A microscopic insight into hybrid CH₄ physisorption-hydrate formation in halloysite nanotubes (HNTs) is vital for understanding the solidification storage of natural gas in the HNTs and developing energy storage technology. Herein, large-scale microsecond classical molecular dynamics simulations are conducted to investigate CH₄ storage in the HNTs via the adsorption-hydration hybrid (AHH) method to reveal the effect of gas-water ratio. The simulation results indicate that the HNTs are excellent nanomaterials for CH₄ storage via the adsorption-hydration hybrid method. The CH₄ physisorption and hydrate formation inside and outside of the HNTs are profoundly influenced by the surface properties of the HNTs and the kinetic characteristics of CH₄/H₂O molecules. The outer surfaces of the HNTs exhibit relative hydrophobicity and adsorb CH₄ molecules to form nanobubbles. Moreover, CH₄ molecules adsorbed on the outer surface are tightly trapped between the hydrate solids and the outer surface, inhibiting their kinetic behavior and favoring CH₄ storage via physisorption. The inner surface of the HNTs exhibits extreme hydrophilicity and strongly adsorbs H₂O molecules; thus, CH₄ hydrate can form inside of the HNTs. It is more difficult for CH₄ and H₂O molecules inside of the HNTs to convert into hydrates than for those outside of the HNTs. A moderate gas-water ratio is advantageous for CH₄ physisorption and hydrate formation, whereas excessively high or low gas-water ratios are unfavorable for efficient CH₄ storage. These insights can help to develop an efficient CH₄ solidification storage technology.

Non-polarizable force fields fail to accurately predict free energies of aqueous electrolytes without compromising the predictive ability for densities and transport properties. A new approach is presented in which (1) TIP4P/2005 water and scaled charge force fields are used to describe the interactions in the liquid phase and (2) an additional Effective Charge Surface (ECS) is used to compute free energies at zero additional computational expense. The ECS is obtained using a single temperature-independent charge scaling parameter per species. Thereby, the chemical potential of water and the free energies of hydration of various aqueous salts (e.g., NaCl and LiCl) are accurately described (deviations less than 5% from experiments), in sharp contrast to calculations where the ECS is omitted (deviations larger than 20%). This approach enables accurate predictions of free energies of aqueous electrolyte solutions using non-polarizable force fields, without compromising liquid-phase properties.

H₂-CO₂ mixtures find wide-ranging applications, including their growing significance as synthetic fuels in the transportation industry, relevance in capture technologies for carbon capture and storage, occurrence in subsurface storage of hydrogen, and hydrogenation of carbon dioxide to form hydrocarbons and alcohols. Here, we focus on the thermodynamic properties of H₂-CO₂ mixtures pertinent to underground hydrogen storage in depleted gas reservoirs. Molecular dynamics simulations are used to compute mutual (Fick) diffusivities for a wide range of pressures (5 to 50 MPa), temperatures (323.15 to 423.15 K), and mixture compositions (hydrogen mole fraction from 0 to 1). At 5 MPa, the computed mutual diffusivities agree within 5% with the kinetic theory of Chapman and Enskog at 423.15 K, albeit exhibiting deviations of up to 25% between 323.15 and 373.15 K. Even at 50 MPa, kinetic theory predictions match computed diffusivities within 15% for mixtures comprising over 80% H₂ due to the ideal-gas-like behavior. In mixtures with higher concentrations of CO₂, the Moggridge correlation emerges as a dependable substitute for the kinetic theory. Specifically, when the CO₂ content reaches 50%, the Moggridge correlation achieves predictions within 10% of the computed Fick diffusivities. Phase equilibria of ternary mixtures involving CO₂-H₂-NaCl were explored using Gibbs Ensemble (GE) simulations with the Continuous Fractional Component Monte Carlo (CFCMC) technique. The computed solubilities of CO₂ and H₂ in NaCl brine increased with the fugacity of the respective component but decreased with NaCl concentration (salting out effect). While the solubility of CO₂ in NaCl brine decreased in the ternary system compared to the binary CO₂-NaCl brine system, the solubility of H₂ in NaCl brine increased less in the ternary system compared to the binary H₂-NaCl brine system. The cooperative effect of H₂-CO₂ enhances the H₂ solubility while suppressing the CO₂ solubility. The water content in the gas phase was found to be intermediate between H₂-NaCl brine and CO₂-NaCl brine systems. Our findings have implications for hydrogen storage and chemical technologies dealing with CO₂-H₂ mixtures, particularly where experimental data are lacking, emphasizing the need for reliable thermodynamic data on H₂-CO₂ mixtures.

Both CH₄ hydrate accumulation and hydrate-based CO₂ sequestration involve hydrate formation in mixed clay sediments. The development of realistic clay models and a nanoscale understanding of hydrate formation in mixed clay sediments are crucial for energy recovery and carbon sequestration. Here, we propose a novel molecular model of pseudo-hexagonal montmorillonite nanoparticles. The stress-strain curves of tension, compression, and shear of pseudo-hexagonal montmorillonite nanoparticles exhibit linear characteristics, with tension, compression, and shear moduli of ∼435, 410, and 137 GPa, respectively. We perform microsecond molecular dynamics simulations to study CH₄ and CH₄/CO₂ hydrate formation in montmorillonite-illite mixed clay sediments with surface defects. The results indicate that hydrate formation in mixed clay sediments is significantly influenced by the presence of clay defects. CH₄ and CH₄/CO₂ mixed hydrates are challenging to form at the junction between the inside and outside clay defects. CH₄ and CH₄/CO₂ mixed hydrates exhibit a preference for forming outside the clay defects rather than inside the clay defects. Some CH₄ and CO₂ molecules from the inside clay defect migrate to the outside clay defect, thereby promoting CH₄ and CH₄/CO₂ mixed hydrate formation outside the clay defects. This molecular insight advances the development of clay particle models and expands an understanding of natural gas hydrate accumulation and hydrate-based CO₂ sequestration.

Knowledge of the microscopic behavior of CO₂ hydrates in oceanic sediments is crucial to evaluate the efficiency and stability of hydrate-based CO₂ sequestration in oceans. Here, systematic molecular dynamics simulations are executed to investigate the growth and dissociation of CO₂ hydrates, and the mechanical instability of CO₂ hydrate-Illite interface in the brine-urea-Illite system. Simulation results show that the CO₂ hydrate growth is jointly affected by the confined space, Illite surface properties, and presence of urea. Specifically, the interfacial H₂O and the ion layer on the Illite surface hinder the growth of CO₂ hydrate crystals toward Illite surfaces. Urea molecules can bind salt ions and increase CO₂ concentrations in the water, thus kinetically promoting CO₂ hydrate growth. The dissociation of the CO₂ hydrate is affected by Illite surface properties and the CO₂ hydrate structure. CO₂ hydrate starts from the regions where hydrate particles are minimally in contact and extends on both sides. The mechanical tension and compression of the CO₂ hydrate-Illite interface exhibit nonlinear characteristics by changing the hydrogen bonds and the CO₂ hydrate structure. The molecular insight into the microscopic behavior of CO₂ hydrates in the brine-urea-Illite system contributes to a broader understanding of hydrate-based CO₂ sequestration.

Vapor-Liquid Equilibria (VLE) of hydrogen (H₂) and aqueous electrolyte (KOH and NaCl) solutions are central to numerous industrial applications such as alkaline electrolysis and underground hydrogen storage. Continuous fractional component Monte Carlo simulations are performed to compute the VLE of H₂ and aqueous electrolyte solutions at 298-423 K, 10-400 bar, 0-8 mol KOH/kg water, and 0-6 mol NaCl/kg water. The densities and activities of water in aqueous KOH and NaCl solutions are accurately modeled (within 2% deviation from experiments) using the non-polarizable Madrid-2019 Na⁺/Cl⁻ ion force fields for NaCl and the Madrid-Transport K⁺ and Delft Force Field of OH⁻ for KOH, combined with the TIP4P/2005 water force field. A free energy correction (independent of pressure, salt type, and salt molality) is applied to the computed infinite dilution excess chemical potentials of H₂ and water, resulting in accurate predictions (within 5% of experiments) for the solubilities of H₂ in water and the saturated vapor pressures of water for a temperature range of 298-363 K. The compositions of water and H₂ are computed using an iterative scheme from the liquid phase excess chemical potentials and densities, in which the gas phase fugacities are computed using the GERG-2008 equation of state. For the first time, the VLE of H₂ and aqueous KOH/NaCl systems are accurately captured with respect to experiments (i.e., for both the liquid and gas phase compositions) without compromising the liquid phase properties or performing any refitting of force fields.

Continuous Fractional Component Monte Carlo (CFCMC) and molecular dynamics (MD) simulations are performed to calculate the solubilities and self-diffusion coefficients of four light n-alkanes (methane, ethane, propane, and n-butane) in aqueous NaCl solutions as well as the thermodynamic properties of their corresponding hydrate crystals. Correction factors k_ij to the Lorentz-Berthelot combining rules for alkane groups (CH₃) and water are optimized (k_ij = 1.04) by fitting excess chemical potentials to experimental data at 1 bar and 298.15 K. Using these values of k_ij, we calculate the solubilities of the four alkanes in aqueous NaCl solutions with different molalities (0-6) mol/kg at different temperatures (278.15-308.15) K and pressures (1, 100, 200, 300) bar. The diffusion coefficients of the four alkanes in NaCl solutions (0-6) mol/kg are calculated at different temperatures (278.15-308.15) K and 1 bar and corrected for the finite-size effects. The lattice parameters of the corresponding hydrates with different guest molecules are computed using MD simulations at different temperatures (150-290) K and pressures (5-700) MPa. Isothermal compressibilities at 287.15 K and thermal expansion coefficients at 14.5 MPa for the corresponding hydrates are calculated. We present an extensive collection of thermodynamic data related to gas hydrates that contribute to a fundamental understanding of natural gas hydrate science.

Thermodynamic factors for diffusion connect the Fick and Maxwell-Stefan diffusion coefficients used to quantify mass transfer. Activity coefficient models or equations of state can be fitted to experimental or simulation data, from which thermodynamic factors can be obtained by differentiation. The accuracy of thermodynamic factors determined using indirect routes is dictated by the specific choice of an activity coefficient model or an equation of state. The Permuted Widom’s Test Particle Insertion (PWTPI) method developed by Balaji et al. enables direct determination of thermodynamic factors in binary and multicomponent systems. For highly dense systems, for example, typical liquids, it is well known that molecular test insertion methods fail. In this article, we use the Continuous Fractional Component Monte Carlo (CFCMC) method to directly calculate thermodynamic factors by adopting the PWTPI method. The CFCMC method uses fractional molecules whose interactions with their surrounding molecules are modulated by a coupling parameter. Even in highly dense systems, the CFCMC method efficiently handles molecule insertions and removals, overcoming the limitations of the PWTPI method. We show excellent agreement between the results of the PWTPI and CFCMC methods for the calculation of thermodynamic factors in binary systems of Lennard-Jones molecules and ternary systems of Weeks-Chandler-Andersen molecules. The CFCMC method applied to calculate the thermodynamic factors of realistic molecular systems consisting of binary mixtures of carbon dioxide and hydrogen agrees well with the NIST REFPROP database. Our study highlights the effectiveness of the CFCMC method in determining thermodynamic factors for diffusion, even in densely packed systems, using relatively small numbers of molecules.