Real-Time Detection and Classification of Purkinje-Cell Neural Activity

Master Thesis (2023)
Authors

D.A. Vrijenhoek (TU Delft - Electrical Engineering, Mathematics and Computer Science)

Supervisors

S. Hamdioui (TU Delft - Quantum & Computer Engineering)

A.B. Gebregiorgis (TU Delft - Computer Engineering)

Muhammad Ali Siddiqi (TU Delft - Computer Engineering)

Faculty
Electrical Engineering, Mathematics and Computer Science, Electrical Engineering, Mathematics and Computer Science
Copyright
© 2023 David Vrijenhoek
More Info
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Publication Year
2023
Language
English
Copyright
© 2023 David Vrijenhoek
Graduation Date
05-07-2023
Awarding Institution
Delft University of Technology
Programme
Computer Engineering
Faculty
Electrical Engineering, Mathematics and Computer Science, Electrical Engineering, Mathematics and Computer Science
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Abstract

Purkinje cell is a type of neuron that can be found in the cerebellum. What characterises Purkinje cell neural activity is the fact that it exhibits two types of spiking behaviour; the so-called simple and complex spikes. These two types of spikes are thought to play a role in motor functionality. In order to better understand the relationship between Purkinje cell neural activity and the motor-cortex, neuroscientists record such neural activity in mice. However, current experimental setups pose a challenge as they involve a wired connection between the animal’s head stage and the recording device, which limits the mouse’s natural behaviour by restricting its movement. This work proposes a lightweight neural-spike detection and classification architecture for acquiring Purkinje cell neural activity. The proposed design discards unneeded information, by detecting and classifying spikes in real-time. This type of compression enables data storage on a removable device in the head stage, freeing mice from wires. Its small formfactor allows unrestricted movement during experiments, while a power-efficient design ensures long-termoperation. The performance of the algorithm has been evaluated using a software implementation, yielding a combined accuracy for detection and classification ranging from 92.74% to 94.54%. The system has been synthesised using the 45 nm Nangate Open Cell library resulting in an ASIC with an area of 0.22mm2 and a power consumption of 0.412mW.

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