J.C. van Gemert
Please Note
86 records found
1
MSD
A Benchmark Dataset for Floor Plan Generation of Building Complexes
Making Every Event Count
Balancing Data Efficiency and Accuracy in Event Camera Subsampling
HAVANA
Hierarchical Stochastic Neighbor Embedding for Accelerated Video ANnotAtions
CleanUMamba
A Compact Mamba Network for Speech Denoising using Channel Pruning
This paper presents CleanUMamba, a time-domain neural network architecture designed for real-time causal audio denoising directly applied to raw waveforms. CleanUMamba leverages a U-Net encoder-decoder structure, incorporating the Mamba state-space model in the bottleneck layer. By replacing conventional self-attention and LSTM mechanisms with Mamba, our architecture offers superior denoising performance while maintaining a constant memory footprint, enabling streaming operation. To enhance efficiency, we applied structured channel pruning, achieving an 8X reduction in model size without compromising audio quality. Our model demonstrates strong results in the Interspeech 2020 Deep Noise Suppression challenge. Specifically, CleanUMamba achieves a PESQ score of 2.42 and STOI of 95.1% with only 442K parameters and 468M MACs, matching or outperforming larger models in real-time performance. Code will be available at: https://github.com/lab-emi/CleanUMamba
Learning Physics From Video
Unsupervised Physical Parameter Estimation for Continuous Dynamical Systems
Learn & drop
Fast learning of cnns based on layer dropping
Quantitative cardiac magnetic resonance imaging (MRI) is an increasingly important diagnostic tool for cardiovascular diseases. Yet, co-registration of all baseline images within the quantitative MRI sequence is essential for the accuracy and precision of quantitative maps. However, co-registering all baseline images from a quantitative cardiac MRI sequence remains a nontrivial task because of the simultaneous changes in intensity and contrast, in combination with cardiac and respiratory motion. To address the challenge, we propose a novel motion correction framework based on robust principle component analysis (rPCA) that decomposes quantitative cardiac MRI into low-rank and sparse components, and we integrate the groupwise CNN-based registration backbone within the rPCA framework. The low-rank component of rPCA corresponds to the quantitative mapping (i.e. limited degree of freedom in variation), while the sparse component corresponds to the residual motion, making it easier to formulate and solve the groupwise registration problem. We evaluated our proposed method on cardiac T1 mapping by the modified Look-Locker inversion recovery (MOLLI) sequence, both before and after the Gadolinium contrast agent administration. Our experiments showed that our method effectively improved registration performance over baseline methods without introducing rPCA, and reduced quantitative mapping error in both in-domain (pre-contrast MOLLI) and out-of-domain (post-contrast MOLLI) inference. The proposed rPCA framework is generic and can be integrated with other registration backbones.
Literature on medical imaging segmentation claims that hybrid UNet models containing both Transformer and convolutional blocks perform better than purely convolutional UNet models. This recently touted success of hybrid Transformers warrants an investigation into which of its components contribute to its performance. Also, previous work has a limitation of analysis only at fixed dataset scales as well as unfair comparisons with other models where parameter counts are not equivalent. Here, we investigate the performance of a hybrid Transformer network i.e. the nnFormer for organ segmentation in prostate CT scans. We do this in context of replacing its various components and by constructing learning curves by plotting model performance at different dataset scales. To compare with literature, the first experiment replaces all the shifted-window(swin) Transformer blocks of the nnFormer with convolutions. Results show that the convolution prevails as the data scale increases. In the second experiment, to reduce complexity, the self-attention mechanism within the swin-Transformer block is replaced with an similar albeit simpler spatial mixing operation i.e. max-pooling. We observe improved performance for max-pooling in smaller dataset scales, indicating that the window-based Transformer may not be the best choice in both small and larger dataset scales. Finally, since convolution has an inherent local inductive bias of positional information, we conduct a third experiment to imbibe such a property to the Transformer by exploring two kinds of positional encodings. The results show that there are insignificant improvements after adding positional encoding, indicating the hybrid swin-Transformers deficiency in capturing positional information given our dataset at its various scales. Through this work, we hope to motivate the community to use learning curves under fair experimental settings to evaluate the efficacy of newer architectures like Transformers for their medical imaging tasks. Code is available on https://github.com/prerakmody/ window-transformer-prostate-segmentation.
Video BagNet
Short temporal receptive fields increase robustness in long-term action recognition
In this paper we show how Group Equivariant Convolutional Neural Networks use subsampling to learn to break equivariance to the rotation and reflection symmetries. We focus on the 2D rotations and reflections and investigate the impact of the broken equivariance on network performance. We show that a change in the input dimension of a network as small as a single pixel can be enough for commonly used architectures to become approximately equivariant, rather than exactly. We investigate the impact of networks not being exactly equivariant and find that approximately equivariant networks generalise significantly worse to unseen symmetries compared to their exactly equivariant counterparts. However, when the symmetries in the training data are not identical to the symmetries of the network, we find that approximately equivariant networks can relax their equivariance constraints, matching or outperforming exactly equivariant networks on common benchmarks.
SSIG
A Visually-Guided Graph Edit Distance for Floor Plan Similarity