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T. Hilberath

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18 records found

Journal article (2026) - Bin Wu, Yunjian Ma, Limei Ren, Chiara Domestici, Yutong Wang, Thomas Hilberath, Ulf Hanefeld, Evgeny A. Pidko, Frank Hollmann, More authors...
Transesterification reactions are fundamental transformations in organic chemistry, yet performing them in aqueous media is challenging because of the competing hydrolysis reaction. In this study, we describe a mutant of alcohol oxidase from Phanerochaete chrysosporium (PcAOx-VPN) that also exhibits transesterification activity. Moreover, PcAOx-VPN displays no detectable hydrolytic activity, owing to its hydrophobic active site, which effectively excludes water. These characteristics make PcAOx-VPN a promising catalyst for transesterification reactions in aqueous media, a context that is typically compromised by competing hydrolysis. ...
Engineering an acid–base dyad into the peroxygenase-enabled mutant CYP199A4T252E yielded four in silico-designed double mutants, of which CYP199A4F182R/T252E showed the best dyad-like geometry and was characterized further. It delivered 10-fold higher initial H2O2-driven O-demethylation activity than wild type and CYP199A4T252E, alongside reduced catalase activity and improved peroxide utilization. However, it was more prone to H2O2-induced heme bleaching and rapid inactivation under standard dosing; slow, controlled H2O2 feeding sustained catalysis for hours. Overall, adding a second basic residue boosts per-oxy-gen-ase-like activity but reduces oxidative robustness, underscoring the trade-off between efficiency and peroxide tolerance and guiding future engineering of robust P450 peroxygenases. ...
Book chapter (2025) - Thomas Hilberath, Frank Hollmann, Florian Tieves, Wuyuan Zhang
Peroxygenases represent a class of versatile heme-thiolate enzymes capable of catalysing highly selective oxyfunctionalisation reactions, particularly the hydroxylation of non-activated C-H bonds. This transformation, which poses substantial challenges in conventional organic synthesis, underscores the potential of peroxygenases in green chemistry applications. While cytochrome P450 monooxygenases have long been the primary focus for such biocatalytic transformations, their industrial adoption has been limited due to complex electron transfer chains and cofactor requirements. In contrast, peroxygenases bypass these limitations by directly utilising hydrogen peroxide (H2O2) to activate the catalytic heme site, thereby circumventing the oxygen dilemma typically encountered in P450 catalysis. Key milestones in peroxygenase research include the identification of chloroperoxidase from Caldariomyces fumago and the subsequent discovery of unspecific peroxygenases, such as those from Agrocybe aegerita, which exhibit broad substrate specificity and high catalytic efficiency. Here, we explore the mechanistic pathway of peroxygenase-catalysed reactions, emphasising the formation and decay of Compound I and the catalytic cycle’s various functional outcomes. Critical aspects such as in situ H2O2 generation to mitigate enzyme inactivation, substrate loading strategies for practical applications, and the role of enzyme and reaction engineering in enhancing regio- and stereoselectivity are examined. Additionally, we address challenges in reaction scalability and operational stability for preparative-scale applications, offering insights into innovative protocols involving immobilised enzymes and non-aqueous reaction media. This review highlights recent advancements in the peroxygenase field and underscores the enzyme’s promising role in sustainable oxyfunctionalisation reactions. ...
Journal article (2025) - Fabian Schmitz, Maike Hoffrogge, Katja Koschorreck, Yasuhisa Fukuta, Alessandra Raffaele, Florian Tieves, Thomas Hilberath, Frank Hollmann, Vlada B. Urlacher
Heme-containing unspecific peroxygenases (UPOs) have attracted significant attention as biocatalysts for oxidation reactions due to their ability to function without expensive nicotinamide cofactors. In the recent study, the UPO from aspergillus brasiliensis (AbrUPO) is found to catalyze the aromatic hydroxylation of substituted benzenes, a feature that distinguishes AbrUPO from other reported wild-type UPOs. To elucidate the underlying factors in the active site and substrate access channel of AbrUPO—which contains fewer phenylalanine residues compared to other UPOs that primarily catalyze benzylic hydroxylation—twenty two AbrUPO variants with single, double, triple, or quadruple amino acid substitutions were constructed to mimic the active sites or substrate access channels of other UPOs. A number of mutated variants exhibited altered activity and selectivity, and several positions were identified that influence enzyme chemoselectivity. Among them, substitution of alanine at position 186 with bulkier residues such as phenylalanine or leucine lead to a shift in chemoselectivity toward alkyl chain hydroxylation of substituted benzenes. Molecular docking studies indicated that the A186F mutation restricts the flexibility and reorientation of ethylbenzene in the active site of AbrUPO, thereby preventing oxidation at the aromatic ring while promoting benzylic hydroxylation. ...
Peroxygenases are promising biocatalysts for selective oxyfunctionalization reactions including hydroxylation, epoxidation, and sulfoxidation. In this study, we explore the activity of two recently reported peroxygenases from Collariella virescens (CviUPO) and Daldinia caldariorum (DcaUPO) in a range of synthetically relevant transformations. Both enzymes were heterologously expressed in Escherichia coli and tested for various oxidative reactions. DcaUPO generally demonstrated higher activity compared to CviUPO across several substrates, showing significant conversions in al-cohol and arene oxidations as well as enantioselective epoxidations of styrene derivatives. Notably, the enzymes exhibited complementary selectivities in several reactions including allylic hydroxylation and benzylic oxidation. These results broaden the substrate scope of CviUPO and DcaUPO and highlight their potential for industrial applications. However, challenges with enzyme expression in E. coli remain, necessitating future work on alternative expression systems such as Pichia pastoris to improve yields. ...
Journal article (2024) - Hugo Brasselet, Fabian Schmitz, Katja Koschorreck, Vlada B. Urlacher, Frank Hollmann, Thomas Hilberath
An enzymatic method for the selective hydroxylation of phenols using a peroxygenase from Aspergillus brasiliensis (AbrUPO) is reported. A broad range of phenolic starting materials can be selectively transformed into the corresponding hydroquinones. Semi-preparative syntheses of several hydroquinones were realised without further optimization pointing out the applicability of this enzyme as biocatalyst. ...
Journal article (2024) - Jacob M.A. van Hengst, Allison E. Wolder, Marisa Sánchez, Mieke M.E. Huijbers, Diederik J. Opperman, Pierre Gilles, Juliette Martin, Thomas Hilberath, Frank Hollmann, Caroline E. Paul
Ene-reductases from the old yellow enzyme (OYE) family have been traditionally employed in the reduction of conjugated C═C double bonds. This study explores the underutilized oxidative potential of OYEs, demonstrating their capability to catalyze the enantioselective desaturation of carbonyl compounds. Utilizing a deprotonated tyrosine residue as a catalytic base, we developed a method to enable OYE-catalyzed desaturation at ambient temperature and alkaline pH without the need for high-temperature conditions. Through screening of various OYE enzymes, we identified several candidates from different genera with enhanced desaturase activity across different substrates. This work broadens the scope of biocatalytic applications for OYEs, introducing a novel approach to the synthesis of chiral α,β-unsaturated carbonyl compounds. ...
Journal article (2024) - Elisa De Marchi, Thomas Hilberath, Claudio Zippilli, Ron Wever, Raffaele Saladino, Frank Hollmann, Lorenzo Botta
Vicinal halohydrins are key building blocks to produce bioactive molecules and drugs, especially if they can be obtained in enantiomerically pure form. In this study, we present a bi-enzymatic sequence that allows to obtain vic-halohydrins through a photochemoenzymatic olefin hydroxy halogenation followed by a lipase catalysed kinetic resolution. The absolute configuration of the resulting products was determined using Mosher's method. ...
Review (2023) - X. Xu, T. Hilberath, F. Hollmann
Heme-dependent oxygenases (i.e. P450 monooxygenases and peroxygenases) are highly selective catalysts for the selective oxyfunctionalisation or organic compounds. Both enzyme classes exhibit mechanistic similarities (i.e. using so-called compound I (CpdI) as active oxidation species) and differences in how CpdI is formed. From the differences also practical differences arise which may influence the scalability, economic attractiveness and environmental impact of P450 monooxygenase- or peroxygenase-catalysed reactions. In this contribution we propose a range of performance indicators to compare the potential of both enzyme classes. ...
Hydrogels that can disintegrate upon exposure to reactive oxygen species (ROS) have the potential for targeted drug delivery to tumor cells. In this study, we developed a diphenylalanine (FF) derivative with a thioether phenyl moiety attached to the N-terminus that can form supramolecular hydrogels at neutral and mildly acidic pH. The thioether can be oxidized by ROS to the corresponding sulfoxide, which makes the gelator hydrolytically labile. The resulting oxidation and hydrolysis products alter the polarity of the gelator, leading to disassembly of the gel fibers. To enhance ROS sensitivity, we incorporated peroxizymes in the gels, namely, chloroperoxidase CiVCPO and the unspecific peroxygenase rAaeUPO. Both enzymes accelerated the oxidation process, enabling the hydrogels to collapse with 10 times lower H2O2 concentrations than those required for enzyme-free hydrogel collapse. These ROS-responsive hydrogels could pave the way toward optimized platforms for targeted drug delivery in the tumor microenvironment. ...
Journal article (2023) - Chiara Domestici, Yinqi Wu, Thomas Hilberath, Miguel Alcalde, Frank Hollmann, Alceo Macchioni
Unspecific peroxygenases (UPOs) are promising biocatalysts for oxyfunctionalisation reactions, owing to their simplicity of handling, stability and robustness. A limitation of using UPOs on a large scale is their deactivation in the presence of even rather modest concentrations of H2O2, requiring a constant and controlled supply of low amount of H2O2. Herein, we report an organometallic complex [Cp*Ir(pica)NO3] {pica=picolinamidate=κ2-pyridine-2-carboxamide ion (−1)} 1 capable of efficiently regenerating FMNH2 from FMN (TOF=350 h−1, 298 K), driven by NaHCOO; FMNH2, in turn, spontaneously reacts with O2 leading to H2O2. After having studied the compatibility of 1 with the UPO from Agrocybe aegerita (rAaeUPO PaDa-I) and individuated the best experimental conditions, we applied such a hybrid catalytic tandem in some hydroxylation, epoxidation and sulfoxidation reactions. Best performances were obtained by using a 1/rAaeUPO molar ratio of 50. TONs for the biocatalyst of up to 18933 were obtained for the transformation of ethylbenzene derivatives into (R)-1-phenylethanols (ee>99 %). 1/rAaeUPO was found to oxidise also cis-methyl styrene (TON=13488), leading exclusively (1R,2S)-cis-methyl styrene oxide (ee>99 %), cyclohexane (TON=1634) and thioanisole (TON=1369). ...
Journal article (2023) - Thomas Hilberath, Remco Van Oosten, Juliet Victoria, Hugo Brasselet, Miguel Alcalde, John M. Woodley, Frank Hollmann
Mol-scale oxyfunctionalization of cyclohexane to cyclohexanol/cyclohexanone (KA-oil) using an unspecific peroxygenase is reported. Using AaeUPO from Agrocybe aegerita and simple H2O2 as an oxidant, cyclohexanol concentrations of more than 300 mM (>60% yield) at attractive productivities (157 mM h-1, approx. 15 g L-1 h-1) were achieved. Current limitations of the proposed biooxidation system have been identified paving the way for future improvements and implementation. ...
Journal article (2023) - Yinqi Wu, Caroline E. Paul, Thomas Hilberath, Ewald P.J. Jongkind, Wuyuan Zhang, Miguel Alcalde, Frank Hollmann
Utilisation of fatty acids generally relies on pre-existing functional groups such as the carboxylate group or C=C-double bonds. Addition of new functionalities into the hydrocarbon part opens up new possibilities for fatty acid valorisation. In this contribution we demonstrate the synthetic potential of a peroxygenase mutant AaeUPO−Fett for selective fatty acid oxyfunctionalisation. The ω-1 hydroxy fatty acid (esters) produced are further transformed into lactones, alcohols, esters and amines via multi-enzyme cascades thereby paving the way for new fatty acid valorisation pathways. ...
Journal article (2022) - Jinhyun Kim, Yunna Um, Seunghyun Han, Thomas Hilberath, Yong Hwan Kim, Frank Hollmann, Chan Beum Park
The pulp and paper manufacturers generate approximately 50 million metric tons of lignin per annum, most of which has been abandoned or incinerated because of lignin's recalcitrant nature. Here, we report bias-free photoelectrochemical (PEC) oxidation of lignin coupled with asymmetric hydrogenation of C=C bonds. The PEC platform consists of a hematite (α-Fe2O3) photoanode and a silicon photovoltaic-wired mesoporous indium tin oxide (Si/mesoITO) photocathode. We substantiate a new function of photoelectroactivated α-Fe2O3 to extract electrons from lignin. The extracted electrons are transferred to the Si/mesoITO photocathode for regenerating synthetic nicotinamide cofactor analogues (mNADHs). We demonstrate that the reduction kinetics of mNAD+s depend on their reduction peak potentials. The regenerated mNADHs activate ene-reductases from the old yellow enzyme (OYE) family, which catalyze enantioselective reduction of α,β-unsaturated hydrocarbons. This lignin-fueled biocatalytic PEC system exhibits an excellent OYE's turnover frequency and total turnover number for photobiocatalytic trans-hydrogenation through cofactor regeneration. This work presents the first example of PEC regeneration of mNADHs and opens up a sustainable route for bias-free chemical synthesis using renewable lignin waste as an electron feedstock. ...
Journal article (2022) - Jaeho Yoon, Hanhwi Jang, Min Wook Oh, Thomas Hilberath, Frank Hollmann, Yeon Sik Jung, Chan Beum Park
Heat is a fundamental feedstock, where more than 80% of global energy comes from fossil-based heating process. However, it is mostly wasted due to a lack of proper techniques of utilizing the low-quality waste heat (<100 °C). Here we report thermoelectrobiocatalytic chemical conversion systems for heat-fueled, enzyme-catalyzed oxyfunctionalization reactions. Thermoelectric bismuth telluride (Bi2Te3) directly converts low-temperature waste heat into chemical energy in the form of H2O2 near room temperature. The streamlined reaction scheme (e.g., water, heat, enzyme, and thermoelectric material) promotes enantio- and chemo-selective hydroxylation and epoxidation of representative substrates (e.g., ethylbenzene, propylbenzene, tetralin, cyclohexane, cis-β-methylstyrene), achieving a maximum total turnover number of rAaeUPO (TTNrAaeUPO) over 32000. Direct conversion of vehicle exhaust heat into the enantiopure enzymatic product with a rate of 231.4 μM h−1 during urban driving envisions the practical feasibility of thermoelectrobiocatalysis. ...
Journal article (2022) - Claudio Zippilli, Miguel Jimenez Bartolome, Thomas Hilberath, Lorenzo Botta, Frank Hollmann, Raffaele Saladino
A photochemoenzymatic halodecarboxylation of ferulic acid was achieved using vanadate-dependent chloroperoxidase as (bio)catalyst and oxygen and organic solvent as sole stoichiometric reagents in a biphasic system. Performance and selectivity were improved through a phase transfer catalyst, reaching a turnover number of 660.000 for the enzyme. ...
Journal article (2022) - Eva Puchľová, T. Hilberath, Kvetoslava Vranková, F. Hollmann
Non-enantioselective alcohol dehydrogenases (ADHs) are rarely found in the biocatalysis portfolio. Generally, highly enantioselective ADHs are sought for. Using such ADHs for the oxidation of racemic alcohols generally results in a kinetic resolution of the starting material, which is unfavourable if the ketone represents the product of interest. In the current contribution we report the ADH from Sphingobium yanoikuyae (SyADH) as non-enantioselective ADH for the complete oxidation or rac-heptan-2-ol (representing further 2-alkanols). ...
Journal article (2022) - T. Hilberath, A.G.L. van Troost, Miguel Alcalde, F. Hollmann
The use of water-miscible organic co-solvents in biocatalysis is a simple procedure for obtaining higher enzymatic activities toward hydrophobic substrates. However, effects on activity and stability have to be carefully evaluated, also with regard to the type and concentration of the respective co-solvent. In this contribution, we investigated and evaluated the effect of some common water-miscible co-solvents on the biocatalytic performance of the recombinant unspecific peroxygenase rAaeUPO from Agrocybe aegerita. rAaeUPO showed promising activities in the presence of high concentrations of the best co-solvent acetonitrile, which enabled to use higher substrate concentrations (≥100 mM). Employing high acetonitrile concentrations for UPO-mediated oxidation of ethylbenzene to (R)-1-phenylethanol was demonstrated under preparative scale conditions and led to product accumulation rates of 31 mM h−1. ...